RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, human

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPSA-208	ENST00000487876	DNAI2	Q9GZS0	605 aa		13.61	□□□□□ -0.23
RPSA-208	ENST00000487876	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.61	□□□□□ -0.23
RPSA-208	ENST00000487876	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.61	□□□□□ -0.23
RPSA-208	ENST00000487876	PNPLA8	Q9NP80	782 aa		13.61	□□□□□ -0.23
RPSA-208	ENST00000487876	PRMT8	Q9NR22	394 aa	Predicted RBP	13.61	□□□□□ -0.23
RPSA-208	ENST00000487876	TLR8	Q9NR97	1041 aa	Known RBP	13.61	□□□□□ -0.23
RPSA-208	ENST00000487876	NUDT5	Q9UKK9	219 aa		13.61	□□□□□ -0.23
RPSA-208	ENST00000487876	TSPAN16	Q9UKR8	245 aa		13.61	□□□□□ -0.23
RPSA-208	ENST00000487876	PCDHB4	Q9Y5E5	795 aa		13.61	□□□□□ -0.23
RPSA-208	ENST00000487876	FAM186A	A6NE01	2351 aa		13.61	□□□□□ -0.23
RPSA-208	ENST00000487876	GVINP1	Q7Z2Y8	2422 aa		13.61	□□□□□ -0.23
RPSA-208	ENST00000487876		A0A1W2PQH9	124 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	PROB1	E7EW31	1015 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	RNF225	M0QZC1	329 aa	Predicted RBP	13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	MDM4	O15151	490 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	FGFR1OP	O95684	399 aa	Known RBP	13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	EGF	P01133	1207 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	CYP17A1	P05093	508 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	IRF1	P10914	325 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	HOXC13	P31276	330 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	YWHAE	P62258	255 aa	Known RBP	13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	SATB1	Q01826	763 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	APBA1	Q02410	837 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	PDE4C	Q08493	712 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	LRRC32	Q14392	662 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	GAB4	Q2WGN9	574 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	SGO2	Q562F6	1265 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	HSP90AA4P	Q58FG1	418 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	PKN3	Q6P5Z2	889 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	ASCL5	Q7RTU5	278 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	SCD5	Q86SK9	330 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	PIGZ	Q86VD9	579 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	ANKRD52	Q8NB46	1076 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	EHBP1	Q8NDI1	1231 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	TFAP2B	Q92481	460 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	KREMEN1	Q96MU8	473 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	GBP4	Q96PP9	640 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	CRACR2A	Q9BSW2	395 aa		13.6	□□□□□ -0.23
RPSA-208	ENST00000487876	GPR179	Q6PRD1	2367 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	EP300	Q09472	2414 aa	Predicted RBP	13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	PRR23A	A6NEV1	266 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876		O00370	1275 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	TRDMT1	O14717	391 aa	Known RBP	13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	NFATC1	O95644	943 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	TDGF1	P13385	188 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	BRD2	P25440	801 aa	Known RBP	13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	GALK1	P51570	392 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	BCAT1	P54687	386 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	CETN1	Q12798	172 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	TMEM196	Q5HYL7	178 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	RAB41	Q5JT25	222 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	DGKK	Q5KSL6	1271 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	GJB7	Q6PEY0	223 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	CCDC186	Q7Z3E2	898 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	UBA3	Q8TBC4	463 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	NDRG1	Q92597	394 aa	Known RBP	13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	EZH1	Q92800	747 aa	Predicted RBP	13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	NACA2	Q9H009	215 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	CYLD	Q9NQC7	956 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	NAGPA	Q9UK23	515 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	FBXO4	Q9UKT5	387 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	USP3	Q9Y6I4	520 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	OTOGL	Q3ZCN5	2332 aa		13.59	□□□□□ -0.23
RPSA-208	ENST00000487876	EML5	Q05BV3	1969 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	GFRA3	O60609	400 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	VDR	P11473	427 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	RARG	P13631	454 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	OPRD1	P41143	372 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	ZNF132	P52740	706 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	GCNT1	Q02742	428 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	TPD52L1	Q16890	204 aa	Predicted RBP	13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	PKDCC	Q504Y2	493 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	BHLHA9	Q7RTU4	235 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	BBS7	Q8IWZ6	715 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	ADGRG2	Q8IZP9	1017 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	P2RY13	Q9BPV8	354 aa		13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	KLF16	Q9BXK1	252 aa	Predicted RBP	13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.58	□□□□□ -0.24
RPSA-208	ENST00000487876	E2F8	A0AVK6	867 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	ANTXRL	A6NF34	631 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	PIK3R2	O00459	728 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	XPO1	O14980	1071 aa	Known RBP	13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	GREM1	O60565	184 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	RNF40	O75150	1001 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	PAEP	P09466	180 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	SLC9A1	P19634	815 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	ATP5C1	P36542	298 aa	Known RBP	13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	MTIF2	P46199	727 aa	Known RBP	13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	TKTL1	P51854	596 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	DMWD	Q09019	674 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	ADIG	Q0VDE8	80 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	MESP2	Q0VG99	397 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	BST2	Q10589	180 aa	Known RBP	13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	DHCR24	Q15392	516 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	ZNF528	Q3MIS6	628 aa		13.57	□□□□□ -0.24
RPSA-208	ENST00000487876	C10orf120	Q5SQS8	335 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms