RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 OSCP1Q8WVF1 389 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 ATRIPQ8WXE1 791 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 LPIN2Q92539 896 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 RPL36ALQ969Q0 106 aaKnown RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 MUL1Q969V5 352 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 TMEM41AQ96HV5 264 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 SNX27Q96L92 541 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 SMOC2Q9H3U7 446 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 GLOD4Q9HC38 313 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 NDRG4Q9ULP0 352 aaKnown RBP4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 PCDHGB2Q9Y5G2 931 aa4.44□□□□□ -1.7
HMGB1P36-201ENST00000487709 PODXLO00592 558 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 FFAR2O15552 330 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 NCK2O43639 380 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 SRGNP10124 158 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 IL1R1P14778 569 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 KELP23276 732 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 CCT4P50991 539 aaKnown RBP4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 SOX10P56693 466 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 TUBA4AP68366 448 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 TXNRD1Q16881 649 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 FAM153CQ494X1 144 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 KLHL22Q53GT1 634 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 C10orf62Q5T681 223 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 ZNF618Q5T7W0 954 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 FAXCQ5TGI0 409 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 KLHDC7AQ5VTJ3 777 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 DENND2CQ68D51 928 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 MRNIPQ6NTE8 343 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 CRELD2Q6UXH1 353 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 KRT28Q7Z3Y7 464 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 RAB11FIP4Q86YS3 637 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 RNF152Q8N8N0 203 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 Q8NA96 180 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 PPP2R3CQ969Q6 453 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 KIAA1191Q96A73 305 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 FKBP10Q96AY3 582 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 HAPLN3Q96S86 360 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 ZBTB26Q9HCK0 441 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 NECTIN3Q9NQS3 549 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 SERTAD3Q9UJW9 196 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 USP22Q9UPT9 525 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 MAN2B2Q9Y2E5 1009 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 CNTNAP2Q9UHC6 1331 aa4.43□□□□□ -1.7
HMGB1P36-201ENST00000487709 IFRD1O00458 451 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 SLC16A3O15427 465 aaKnown RBP4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 PROM1O43490 865 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 ONECUT2O95948 504 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 CD19P15391 556 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 PPP3CBP16298 524 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 BTF3P20290 206 aaKnown RBP4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 KCNA3P22001 575 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 HSPA7P48741 367 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 ITGA8P53708 1063 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 HTRA4P83105 476 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 TFF2Q03403 129 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 BLMHQ13867 455 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 RRAGBQ5VZM2 374 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 PLAG1Q6DJT9 500 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 TMPRSS9Q7Z410 1059 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 GATAD2AQ86YP4 633 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 SMC5Q8IY18 1101 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 EXOC8Q8IYI6 725 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 MYCBPAPQ8TBZ2 947 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 POF1BQ8WVV4 589 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 ARPC5LQ9BPX5 153 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 WACQ9BTA9 647 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 DPCDQ9BVM2 203 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 STK33Q9BYT3 514 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 WDR12Q9GZL7 423 aaKnown RBP4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 CXorf36Q9H7Y0 433 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 NRIP3Q9NQ35 241 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 MRPS18AQ9NVS2 196 aaKnown RBP4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 EHD3Q9NZN3 535 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 DNAJB11Q9UBS4 358 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 CCNL1Q9UK58 526 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 SLC39A10Q9ULF5 831 aa4.42□□□□□ -1.7
HMGB1P36-201ENST00000487709 hCG_1984214I3L0E3 225 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 TCEA3O75764 348 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 A1BGP04217 495 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 DLDP09622 509 aaKnown RBP4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 GATA3P23771 443 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 ALDH9A1P49189 494 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 TOB1P50616 345 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 PGDP52209 483 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 TPTEP56180 551 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 GPS1Q13098 491 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 MPEG1Q2M385 716 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 ZNF750Q32MQ0 723 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 DEPDC1Q5TB30 811 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 ANO1Q5XXA6 986 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 TECPR1Q7Z6L1 1165 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 SEMA6DQ8NFY4 1073 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 CYP2W1Q8TAV3 490 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 DNAJB14Q8TBM8 379 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 ABHD5Q8WTS1 349 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 CCT6BQ92526 530 aa4.41□□□□□ -1.7
HMGB1P36-201ENST00000487709 GRAMD1AQ96CP6 724 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms