RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 KIF11P52732 1056 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 GAB4Q2WGN9 574 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 PKN3Q6P5Z2 889 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 EZH1Q92800 747 aaPredicted RBP12.08□□□□□ -0.48
SPEN-205ENST00000487496 SRRTQ9BXP5 876 aaKnown RBP12.08□□□□□ -0.48
SPEN-205ENST00000487496 NACA2Q9H009 215 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 NMUR1Q9HB89 426 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 CYLDQ9NQC7 956 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 OSER1Q9NX31 292 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 TBC1D14Q9P2M4 693 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 USP3Q9Y6I4 520 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 FANCMQ8IYD8 2048 aa12.08□□□□□ -0.48
SPEN-205ENST00000487496 A0A1W2PQH9 124 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 CHURC1-FNTBB4DL54 471 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 P4HA2O15460 535 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 ATG13O75143 517 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 RNF40O75150 1001 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 RARGP13631 454 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 TBXAS1P24557 533 aaPredicted RBP12.07□□□□□ -0.48
SPEN-205ENST00000487496 HOXC13P31276 330 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 ATP5C1P36542 298 aaKnown RBP12.07□□□□□ -0.48
SPEN-205ENST00000487496 OPRD1P41143 372 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 MARSP56192 900 aaKnown RBP12.07□□□□□ -0.48
SPEN-205ENST00000487496 YWHAEP62258 255 aaKnown RBP12.07□□□□□ -0.48
SPEN-205ENST00000487496 DMWDQ09019 674 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 CETN1Q12798 172 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 DHCR24Q15392 516 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 FBXO43Q4G163 708 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 RHBDF2Q6PJF5 856 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 CCDC186Q7Z3E2 898 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 PIGZQ86VD9 579 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 TTC30AQ86WT1 665 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 TRIM59Q8IWR1 403 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 UBR7Q8N806 425 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 ANKRD52Q8NB46 1076 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 LMO3Q8TAP4 145 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 WBP2Q969T9 261 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 NT5C1BQ96P26 610 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 KLF16Q9BXK1 252 aaPredicted RBP12.07□□□□□ -0.48
SPEN-205ENST00000487496 UBXN6Q9BZV1 441 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 EPC1Q9H2F5 836 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 SH3BP1Q9Y3L3 701 aa12.07□□□□□ -0.48
SPEN-205ENST00000487496 HELZP42694 1942 aaKnown RBP12.07□□□□□ -0.48
SPEN-205ENST00000487496 GPR179Q6PRD1 2367 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 EP300Q09472 2414 aaPredicted RBP12.06□□□□□ -0.48
SPEN-205ENST00000487496 IRF1P10914 325 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 CD19P15391 556 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 HOXA6P31267 233 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 FNTBP49356 437 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 PSEN1P49768 467 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 KCNH2Q12809 1159 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 GOLGA7BQ2TAP0 167 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 HEATR6Q6AI08 1181 aaKnown RBP12.06□□□□□ -0.48
SPEN-205ENST00000487496 SCD5Q86SK9 330 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 BBS7Q8IWZ6 715 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 EHBP1Q8NDI1 1231 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 RUBCNQ92622 972 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 OTUB2Q96DC9 234 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 MED15Q96RN5 788 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPEN-205ENST00000487496 CLIC5Q9NZA1 410 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 RWDD2AQ9UIY3 292 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 NAGPAQ9UK23 515 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 NUDT5Q9UKK9 219 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 TSPAN16Q9UKR8 245 aa12.06□□□□□ -0.48
SPEN-205ENST00000487496 MYH10P35580 1976 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 GVINP1Q7Z2Y8 2422 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 GREM1O60565 184 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 FGFR1OPO95684 399 aaKnown RBP12.05□□□□□ -0.48
SPEN-205ENST00000487496 ADH1CP00326 375 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 AFPP02771 609 aaKnown RBP12.05□□□□□ -0.48
SPEN-205ENST00000487496 CCDC192P0DO97 292 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 VDRP11473 427 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 SLC6A11P48066 632 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 TKTL1P51854 596 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 SLC8A3P57103 927 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 PDE4CQ08493 712 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 SGO2Q562F6 1265 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 RAB41Q5JT25 222 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 C10orf120Q5SQS8 335 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 LY6G5CQ5SRR4 150 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 KLHDC10Q6PID8 442 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 TMEM270Q6UE05 265 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 HTR3DQ70Z44 454 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 LONP2Q86WA8 852 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 PPM1KQ8N3J5 372 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 ZNF276Q8N554 614 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 DCLK2Q8N568 766 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 KAT5Q92993 513 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 CLSTN2Q9H4D0 955 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 POLR3BQ9NW08 1133 aaPredicted RBP12.05□□□□□ -0.48
SPEN-205ENST00000487496 DNMT3LQ9UJW3 386 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 KIAA1257Q9ULG3 409 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 SMG5Q9UPR3 1016 aaKnown RBP12.05□□□□□ -0.48
SPEN-205ENST00000487496 PCDHB4Q9Y5E5 795 aa12.05□□□□□ -0.48
SPEN-205ENST00000487496 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.05□□□□□ -0.48
SPEN-205ENST00000487496 OTOGLQ3ZCN5 2332 aa12.04□□□□□ -0.48
SPEN-205ENST00000487496 K7EQS6 105 aa12.04□□□□□ -0.48
SPEN-205ENST00000487496 RNF225M0QZC1 329 aaPredicted RBP12.04□□□□□ -0.48
SPEN-205ENST00000487496 TULP2O00295 520 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms