RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 AOC1P19801 751 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 AVPR1AP37288 418 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 MARSP56192 900 aaKnown RBP7.58□□□□□ -1.2
UBE4B-209ENST00000487244 MAP3K7CLP57077 242 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 STARD6P59095 220 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 ZXDBP98169 803 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 APBA1Q02410 837 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 FCHO2Q0JRZ9 810 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 TCF15Q12870 199 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 CUL2Q13617 745 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 SLC44A4Q53GD3 710 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 WDR44Q5JSH3 913 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 PPP1R26Q5T8A7 1209 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-209ENST00000487244 TRIM68Q6AZZ1 485 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 CLEC20AQ6ZU45 233 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 CCDC105Q8IYK2 499 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 UBR7Q8N806 425 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 MLKLQ8NB16 471 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 CCDC150Q8NCX0 1101 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 DEPDC1BQ8WUY9 529 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 CYFIP2Q96F07 1278 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 CNOT6LQ96LI5 555 aaKnown RBP7.58□□□□□ -1.2
UBE4B-209ENST00000487244 HNRNPABQ99729 332 aaKnown RBP7.58□□□□□ -1.2
UBE4B-209ENST00000487244 DDX23Q9BUQ8 820 aaKnown RBP7.58□□□□□ -1.2
UBE4B-209ENST00000487244 RNF38Q9H0F5 515 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 CSNK1G1Q9HCP0 422 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 TDP1Q9NUW8 608 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 GTSE1Q9NYZ3 720 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 GMIPQ9P107 970 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 GCNT4Q9P109 453 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 UXTQ9UBK9 157 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-209ENST00000487244 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.58□□□□□ -1.2
UBE4B-209ENST00000487244 PIEZO1Q92508 2521 aa7.58□□□□□ -1.2
UBE4B-209ENST00000487244 ATP8B3O60423 1300 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 TRAV19A0A0A6YYK7 116 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 RNF225M0QZC1 329 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 TULP2O00295 520 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 ZNF263O14978 683 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 PMM2O15305 246 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CYP26A1O43174 497 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 ABL1P00519 1130 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 OAS1P00973 400 aaKnown RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 AFPP02771 609 aaKnown RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CKMP06732 381 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 FAM200BP0CF97 657 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 ARSAP15289 507 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 ACO1P21399 889 aaKnown RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 RFX1P22670 979 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 DDX6P26196 483 aaKnown RBP eCLIP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 TARSP26639 723 aaKnown RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 YWHAQP27348 245 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 WEE1P30291 646 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CLCN5P51795 746 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 PFKPQ01813 784 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 USP4Q13107 963 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 UBXN2BQ14CS0 331 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 ZNF77Q15935 545 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 NAIF1Q69YI7 327 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 PHLDB3Q6NSJ2 640 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 GJB7Q6PEY0 223 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 TXNDC11Q6PKC3 985 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 RBM43Q6ZSC3 357 aaKnown RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 C11orf57Q6ZUT1 292 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 RRAGAQ7L523 313 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CREBRFQ8IUR6 639 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 YAF2Q8IY57 180 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CCDC116Q8IYX3 515 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 NUP93Q8N1F7 819 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 PPM1KQ8N3J5 372 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CELF5Q8N6W0 485 aaKnown RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 PJA1Q8NG27 643 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 BPIFB1Q8TDL5 484 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 TFAP2BQ92481 460 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 DNASE1L2Q92874 299 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 IRF7Q92985 503 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 FBXO32Q969P5 355 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CHFRQ96EP1 664 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 TMEM176AQ96HP8 235 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CEP295NLQ96MC4 621 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 HEXIM2Q96MH2 286 aaKnown RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 KREMEN1Q96MU8 473 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 NT5C1BQ96P26 610 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 ZSWIM1Q9BR11 485 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CRACR2AQ9BSW2 395 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 KLF16Q9BXK1 252 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 INTS2Q9H0H0 1204 aaKnown RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CCSER2Q9H7U1 834 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 LTB4R2Q9NPC1 389 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 HPS4Q9NQG7 708 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 SMPD4Q9NXE4 827 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 OBP2AQ9NY56 170 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 IL37Q9NZH6 218 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 TRPM5Q9NZQ8 1165 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 DLGAP2Q9P1A6 1054 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 CHORDC1Q9UHD1 332 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 AJAP1Q9UKB5 411 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-209ENST00000487244 PIAS3Q9Y6X2 628 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 FANCMQ8IYD8 2048 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 FRYLO94915 3013 aa7.57□□□□□ -1.2
UBE4B-209ENST00000487244 ZFHX2Q9C0A1 2572 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms