RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 CEP250Q9BV73 2442 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 MYO16Q9Y6X6 1858 aa20.16■□□□□ 0.82
CLIP2-206ENST00000487091 DCHS1Q96JQ0 3298 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 ADH1CP00326 375 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 RETP07949 1114 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 ACO1P21399 889 aaKnown RBP20.15■□□□□ 0.82
CLIP2-206ENST00000487091 HOXC13P31276 330 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 EIF2DP41214 584 aaKnown RBP20.15■□□□□ 0.82
CLIP2-206ENST00000487091 PGFP49763 221 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 SRSF5Q13243 272 aaKnown RBP20.15■□□□□ 0.82
CLIP2-206ENST00000487091 CBWD6Q4V339 395 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 ZNF394Q53GI3 561 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 DCAF17Q5H9S7 520 aaPredicted RBP20.15■□□□□ 0.82
CLIP2-206ENST00000487091 CBWD3Q5JTY5 395 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 CBWD5Q5RIA9 395 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 PPP1R26Q5T8A7 1209 aaPredicted RBP20.15■□□□□ 0.82
CLIP2-206ENST00000487091 GPRIN1Q7Z2K8 1008 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 TATDN2Q93075 761 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 TMEM176AQ96HP8 235 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 HEXIM2Q96MH2 286 aaKnown RBP20.15■□□□□ 0.82
CLIP2-206ENST00000487091 NACA2Q9H009 215 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 METTL14Q9HCE5 456 aaKnown RBP20.15■□□□□ 0.82
CLIP2-206ENST00000487091 CYLDQ9NQC7 956 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 MAN1B1Q9UKM7 699 aa20.15■□□□□ 0.82
CLIP2-206ENST00000487091 KIAA1549LQ6ZVL6 1849 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 TRIM49BA6NDI0 452 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 K7EQS6 105 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 LRP3O75074 770 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 TGM1P22735 817 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 KIF11P52732 1056 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 FOXK2Q01167 660 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 LPAL2Q16609 132 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 KLHDC10Q6PID8 442 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 SLC4A11Q8NBS3 891 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 SLC35C1Q96A29 364 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 RMDN1Q96DB5 314 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 CEP63Q96MT8 703 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 UBXN6Q9BZV1 441 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 CIZ1Q9ULV3 898 aaPredicted RBP20.14■□□□□ 0.81
CLIP2-206ENST00000487091 SPAG17Q6Q759 2223 aa20.14■□□□□ 0.81
CLIP2-206ENST00000487091 A0A0A0MRY4 1105 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 SCAMP3O14828 347 aaKnown RBP20.13■□□□□ 0.81
CLIP2-206ENST00000487091 ADH5P11766 374 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 ATP5C1P36542 298 aaKnown RBP20.13■□□□□ 0.81
CLIP2-206ENST00000487091 RAD23BP54727 409 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 GAD2Q05329 585 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 DMC1Q14565 340 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 LY6G5CQ5SRR4 150 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 ARHGAP17Q68EM7 881 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 FOXR2Q6PJQ5 311 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 CEP68Q76N32 757 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 ERMP1Q7Z2K6 904 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 ZNF276Q8N554 614 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 USP33Q8TEY7 942 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 GAB3Q8WWW8 586 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 JAKMIP2Q96AA8 810 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 PNKPQ96T60 521 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 KLF16Q9BXK1 252 aaPredicted RBP20.13■□□□□ 0.81
CLIP2-206ENST00000487091 USP3Q9Y6I4 520 aa20.13■□□□□ 0.81
CLIP2-206ENST00000487091 CYP26A1O43174 497 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 CD44P16070 742 aaKnown RBP20.12■□□□□ 0.81
CLIP2-206ENST00000487091 PXNP49023 591 aaPredicted RBP20.12■□□□□ 0.81
CLIP2-206ENST00000487091 PSEN1P49768 467 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 MRPS21P82921 87 aaKnown RBP20.12■□□□□ 0.81
CLIP2-206ENST00000487091 PUM1Q14671 1186 aaKnown RBP eCLIP20.12■□□□□ 0.81
CLIP2-206ENST00000487091 ISM2Q6H9L7 571 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 HTR3DQ70Z44 454 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 CCDC186Q7Z3E2 898 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.12■□□□□ 0.81
CLIP2-206ENST00000487091 BBS7Q8IWZ6 715 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 ARID3AQ99856 593 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 POLR3BQ9NW08 1133 aaPredicted RBP20.12■□□□□ 0.81
CLIP2-206ENST00000487091 OSER1Q9NX31 292 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 DLL3Q9NYJ7 618 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 EBF1Q9UH73 591 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 RALGAPA1Q6GYQ0 2036 aa20.12■□□□□ 0.81
CLIP2-206ENST00000487091 SDK1Q7Z5N4 2213 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 PRR5-ARHGAP8B1AHC4 643 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.11■□□□□ 0.81
CLIP2-206ENST00000487091 PMM2O15305 246 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 HOXC11O43248 304 aaPredicted RBP20.11■□□□□ 0.81
CLIP2-206ENST00000487091 RPP40O75818 363 aaKnown RBP20.11■□□□□ 0.81
CLIP2-206ENST00000487091 APBB3O95704 486 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 TBX18O95935 607 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 APODP05090 189 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 SDHBP21912 280 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 SLC6A11P48066 632 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 YWHAEP62258 255 aaKnown RBP20.11■□□□□ 0.81
CLIP2-206ENST00000487091 ARHGAP8P85298 464 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 LMNB2Q03252 620 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 GOLGA8FQ08AF8 430 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 GOLGA8DPQ0D2H9 430 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 CUL2Q13617 745 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 CACNA2D4Q7Z3S7 1137 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 TADA2BQ86TJ2 420 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 FAM160A2Q8N612 972 aaPredicted RBP20.11■□□□□ 0.81
CLIP2-206ENST00000487091 HHIPQ96QV1 700 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 NMUR1Q9HB89 426 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 PARD6AQ9NPB6 346 aa20.11■□□□□ 0.81
CLIP2-206ENST00000487091 SPHK2Q9NRA0 654 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms