RNA–Protein interactions for RNA: ENST00000486862.1

OPTN-211, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-211ENST00000486862 RBM41Q96IZ5 413 aaKnown RBP11.33□□□□□ -0.6
OPTN-211ENST00000486862 SPATA17Q96L03 361 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 CFAP57Q96MR6 1250 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 LBHD1Q9BQE6 289 aaPredicted RBP11.33□□□□□ -0.6
OPTN-211ENST00000486862 CLSTN3Q9BQT9 956 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 TRIM62Q9BVG3 475 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 RXFP1Q9HBX9 757 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.33□□□□□ -0.6
OPTN-211ENST00000486862 RRN3Q9NYV6 651 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 SMARCAL1Q9NZC9 954 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 FNIP2Q9P278 1114 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 AFF4Q9UHB7 1163 aaKnown RBP11.33□□□□□ -0.6
OPTN-211ENST00000486862 MAFFQ9ULX9 164 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 STAP1Q9ULZ2 295 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 USP18Q9UMW8 372 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 CDY1Q9Y6F8 540 aa11.33□□□□□ -0.6
OPTN-211ENST00000486862 PLXNA3P51805 1871 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 WDR27A2RRH5 827 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 YJEFN3A6XGL0 299 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 E7ENQ6 273 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ADAM12O43184 909 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 LTFP02788 710 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 URODP06132 367 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 USP17L7P0C7H9 530 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 CTSAP10619 480 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ATP2A2P16615 1042 aaKnown RBP11.32□□□□□ -0.6
OPTN-211ENST00000486862 CETN2P41208 172 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ARSEP51690 589 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 SLC5A3P53794 718 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 HDAC4P56524 1084 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 RPL10AP62906 217 aaKnown RBP11.32□□□□□ -0.6
OPTN-211ENST00000486862 KRT17Q04695 432 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 RAB33AQ14088 237 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 SIX1Q15475 284 aaPredicted RBP11.32□□□□□ -0.6
OPTN-211ENST00000486862 LONRF2Q1L5Z9 754 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ERCC6LQ2NKX8 1250 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ATP13A4Q4VNC1 1196 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 SH3PXD2AQ5TCZ1 1133 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 OTUD1Q5VV17 481 aaPredicted RBP11.32□□□□□ -0.6
OPTN-211ENST00000486862 TXNRD3NBQ6F5E7 133 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 RNF19BQ6ZMZ0 732 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 HFE2Q6ZVN8 426 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 CYP4V2Q6ZWL3 525 aaPredicted RBP11.32□□□□□ -0.6
OPTN-211ENST00000486862 VSIG1Q86XK7 387 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 SCN4BQ8IWT1 228 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ZNF461Q8TAF7 563 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 FAM71BQ8TC56 605 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 FAM172AQ8WUF8 416 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 TEKT4Q8WW24 435 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 MAIP1Q8WWC4 291 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ABHD8Q96I13 439 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 SLITRK1Q96PX8 696 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ZBED2Q9BTP6 218 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ADAM33Q9BZ11 813 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ZBP1Q9H171 429 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 FBXO44Q9H4M3 255 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 RBM12Q9NTZ6 932 aaKnown RBP11.32□□□□□ -0.6
OPTN-211ENST00000486862 TMEM51Q9NW97 253 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 SCML2Q9UQR0 700 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 LZTS1Q9Y250 596 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 SSX2IPQ9Y2D8 614 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 EFR3BQ9Y2G0 817 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 RWDD3Q9Y3V2 267 aa11.32□□□□□ -0.6
OPTN-211ENST00000486862 ZNF487B1APH4 448 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 MDM4O15151 490 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 PRPSAP2O60256 369 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 FGF18O76093 207 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 RTN3O95197 1032 aaPredicted RBP11.31□□□□□ -0.6
OPTN-211ENST00000486862 RARAP10276 462 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 OR1D2P34982 312 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 BMPR1AP36894 532 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 SSR1P43307 286 aaKnown RBP11.31□□□□□ -0.6
OPTN-211ENST00000486862 TUFMP49411 452 aaKnown RBP11.31□□□□□ -0.6
OPTN-211ENST00000486862 SULT1E1P49888 294 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 CDR1P51861 262 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 ARPP19P56211 112 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 ATP11AP98196 1134 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 CREMQ03060 361 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 C2orf54Q08AI8 447 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 KLF1Q13351 362 aaPredicted RBP11.31□□□□□ -0.6
OPTN-211ENST00000486862 CYP1B1Q16678 543 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 GLE1Q53GS7 698 aaKnown RBP11.31□□□□□ -0.6
OPTN-211ENST00000486862 TEX35Q5T0J7 233 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 SYPL2Q5VXT5 272 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 BSPRYQ5W0U4 402 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 AADACL2Q6P093 401 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 DENND5BQ6ZUT9 1274 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 PSTKQ8IV42 348 aaKnown RBP11.31□□□□□ -0.6
OPTN-211ENST00000486862 ZDHHC14Q8IZN3 488 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 VPS52Q8N1B4 723 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 GPR161Q8N6U8 529 aaKnown RBP11.31□□□□□ -0.6
OPTN-211ENST00000486862 C12orf50Q8NA57 414 aaPredicted RBP11.31□□□□□ -0.6
OPTN-211ENST00000486862 SCAMP5Q8TAC9 235 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 RAPGEF5Q92565 580 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 FAM149B1Q96BN6 582 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 PGLYRP2Q96PD5 576 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 PEBP4Q96S96 227 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 CRISPLD1Q9H336 500 aa11.31□□□□□ -0.6
OPTN-211ENST00000486862 NAALADL1Q9UQQ1 740 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms