RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 KBTBD13C9JR72 458 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 SNRPAP09012 282 aaKnown RBP13.73□□□□□ -0.21
HMGN1-216ENST00000486741 SERPINB6P35237 376 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 RPL22P35268 128 aaKnown RBP13.73□□□□□ -0.21
HMGN1-216ENST00000486741 AP1ARQ63HQ0 302 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 TXNRD3NBQ6F5E7 133 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 PLEKHA7Q6IQ23 1121 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 ART4Q93070 314 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 ZFP42Q96MM3 310 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 NUDCD1Q96RS6 583 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 SEPT5Q99719 369 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-216ENST00000486741 EIF2AQ9BY44 585 aaKnown RBP13.73□□□□□ -0.21
HMGN1-216ENST00000486741 RPS6KL1Q9Y6S9 549 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 AVILO75366 819 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 PMPCBO75439 489 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 UNGP13051 313 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-216ENST00000486741 PEX5P50542 639 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 NRLP54845 237 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 WNT7BP56706 349 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 SLC6A3Q01959 620 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 TSNAXIP1Q2TAA8 658 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 KCNT2Q6UVM3 1135 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 UNC45BQ8IWX7 931 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 SLC25A41Q8N5S1 370 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 GPR88Q9GZN0 384 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 CYP4F11Q9HBI6 524 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 PHTF1Q9UMS5 762 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 hCG_1818297A0A087WSY0 165 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 PYGBP11216 843 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 EPHB1P54762 984 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 PDK1Q15118 436 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 TSHZ1Q6ZSZ6 1077 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 URGCPQ8TCY9 931 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 HDAC11Q96DB2 347 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 STAMBPL1Q96FJ0 436 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 PGLYRP2Q96PD5 576 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 C2CD2LO14523 706 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 TREHO43280 583 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 PMLP29590 882 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 SCNN1GP51170 649 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 ALDH18A1P54886 795 aaKnown RBP13.73□□□□□ -0.21
HMGN1-216ENST00000486741 MGAT5BQ3V5L5 792 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 ERMARDQ5T6L9 678 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 IL31Q6EBC2 164 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 MYLK4Q86YV6 388 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-216ENST00000486741 BHMTQ93088 406 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 PGM2Q96G03 612 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 DDX27Q96GQ7 796 aaKnown RBP13.73□□□□□ -0.21
HMGN1-216ENST00000486741 SYT15Q9BQS2 421 aa13.73□□□□□ -0.21
HMGN1-216ENST00000486741 A0A1B0GUL6 1792 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 TRAPPC3O43617 180 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 RABGGTBP53611 331 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 MBTD1Q05BQ5 628 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 PDK2Q15119 407 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 SH3PXD2AQ5TCZ1 1133 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 EXOC3L1Q86VI1 746 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 PARP9Q8IXQ6 854 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 FBXL18Q96ME1 805 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 SHCBP1LQ9BZQ2 653 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 PDZD7Q9H5P4 517 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 CACNG4Q9UBN1 327 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 ZNF112Q9UJU3 913 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 B4GALT4O60513 344 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 LRCH4O75427 683 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 JCHAINP01591 159 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 USP17L7P0C7H9 530 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 TPH1P17752 444 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 TARSP26639 723 aaKnown RBP13.72□□□□□ -0.21
HMGN1-216ENST00000486741 ETFBP38117 255 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 DRG2P55039 364 aaKnown RBP13.72□□□□□ -0.21
HMGN1-216ENST00000486741 YWHAZP63104 245 aaKnown RBP13.72□□□□□ -0.21
HMGN1-216ENST00000486741 FASTKD3Q14CZ7 662 aaKnown RBP13.72□□□□□ -0.21
HMGN1-216ENST00000486741 ZNF410Q86VK4 478 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 ARID3BQ8IVW6 561 aaPredicted RBP13.72□□□□□ -0.21
HMGN1-216ENST00000486741 PCYT2Q99447 389 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 SNRNP25Q9BV90 132 aaKnown RBP13.72□□□□□ -0.21
HMGN1-216ENST00000486741 PPME1Q9Y570 386 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 SLX4Q8IY92 1834 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 UBOX5O94941 541 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 CREB1P16220 341 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 SMPD1P17405 629 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 RAD23BP54727 409 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 DPYSL3Q14195 570 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 PIGZQ86VD9 579 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 SKA2Q8WVK7 121 aaPredicted RBP13.72□□□□□ -0.21
HMGN1-216ENST00000486741 GLT1D1Q96MS3 346 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 SP110Q9HB58 689 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 SHOC2Q9UQ13 582 aa13.72□□□□□ -0.21
HMGN1-216ENST00000486741 APOC4-APOC2K7ER74 178 aa13.71□□□□□ -0.21
HMGN1-216ENST00000486741 APOC2P02655 101 aa13.71□□□□□ -0.21
HMGN1-216ENST00000486741 ABCG1P45844 678 aa13.71□□□□□ -0.21
HMGN1-216ENST00000486741 MMEL1Q495T6 779 aa13.71□□□□□ -0.21
HMGN1-216ENST00000486741 TAF1BQ53T94 588 aaPredicted RBP13.71□□□□□ -0.21
HMGN1-216ENST00000486741 AFAP1L2Q8N4X5 818 aa13.71□□□□□ -0.21
HMGN1-216ENST00000486741 TWNKQ96RR1 684 aa13.71□□□□□ -0.21
HMGN1-216ENST00000486741 UNKQ9C0B0 810 aaKnown RBP13.71□□□□□ -0.21
HMGN1-216ENST00000486741 MANSC1Q9H8J5 431 aa13.71□□□□□ -0.21
HMGN1-216ENST00000486741 SLC40A1Q9NP59 571 aa13.71□□□□□ -0.21
HMGN1-216ENST00000486741 C20orf96Q9NUD7 363 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms