RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 NAGPAQ9UK23 515 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 DNAJC12Q9UKB3 198 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 AJAP1Q9UKB5 411 aaPredicted RBP19.16■□□□□ 0.66
COL1A1-207ENST00000486572 MRPS17Q9Y2R5 130 aaKnown RBP19.16■□□□□ 0.66
COL1A1-207ENST00000486572 SIT1Q9Y3P8 196 aa19.16■□□□□ 0.66
COL1A1-207ENST00000486572 A0A1W2PQH9 124 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 SYCE3A1L190 88 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 SHISA7A6NL88 538 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 MED7O43513 233 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 ZNF18P17022 549 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 GNA15P30679 374 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 IFNAR2P48551 515 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 NUBP1P53384 320 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 FKBP15Q5T1M5 1219 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 TRIM68Q6AZZ1 485 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 DPY19L2P1Q6NXN4 242 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 C1orf228Q6PIY5 440 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 SCD5Q86SK9 330 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 ARHGAP18Q8N392 663 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 KIAA1958Q8N8K9 716 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 TTC8Q8TAM2 541 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 KCTD13Q8WZ19 329 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 SECISBP2LQ93073 1101 aaKnown RBP19.15■□□□□ 0.66
COL1A1-207ENST00000486572 ZFRQ96KR1 1074 aaKnown RBP19.15■□□□□ 0.66
COL1A1-207ENST00000486572 NELL2Q99435 816 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 FUCA2Q9BTY2 467 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 LSM14BQ9BX40 385 aaKnown RBP19.15■□□□□ 0.66
COL1A1-207ENST00000486572 OSBPL6Q9BZF3 934 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 KCNH6Q9H252 994 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 HSD3B7Q9H2F3 369 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 EBF3Q9H4W6 596 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 HPS4Q9NQG7 708 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 DUS2Q9NX74 493 aaKnown RBP19.15■□□□□ 0.66
COL1A1-207ENST00000486572 LIMA1Q9UHB6 759 aaKnown RBP19.15■□□□□ 0.66
COL1A1-207ENST00000486572 RAPGEFL1Q9UHV5 662 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 WNT6Q9Y6F9 365 aa19.15■□□□□ 0.66
COL1A1-207ENST00000486572 SPECC1L-ADORA2AF8WAN1 911 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 THAP12O43422 761 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 ZBED1O96006 694 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 CDK11BP21127 795 aaKnown RBP19.14■□□□□ 0.65
COL1A1-207ENST00000486572 SOX9P48436 509 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 COPB1P53618 953 aaKnown RBP19.14■□□□□ 0.65
COL1A1-207ENST00000486572 ADIGQ0VDE8 80 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 RUNX3Q13761 415 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 MEA1Q16626 185 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 KLHDC7AQ5VTJ3 777 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 TADA2BQ86TJ2 420 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 RALGPS2Q86X27 583 aaPredicted RBP19.14■□□□□ 0.65
COL1A1-207ENST00000486572 CCDC105Q8IYK2 499 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 SIX6OS1Q8N1H7 587 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 SLC35F5Q8WV83 523 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 FAM3CQ92520 227 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 ATP2A3Q93084 1043 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 PRRX2Q99811 253 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 ULBP1Q9BZM6 244 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.14■□□□□ 0.65
COL1A1-207ENST00000486572 CLIC5Q9NZA1 410 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 CFAP97Q9P2B7 532 aa19.14■□□□□ 0.65
COL1A1-207ENST00000486572 FAM170BA6NMN3 283 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 RALAP11233 206 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 RARGP13631 454 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 ARSAP15289 507 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 TARSP26639 723 aaKnown RBP19.13■□□□□ 0.65
COL1A1-207ENST00000486572 CTHP32929 405 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 ATP5C1P36542 298 aaKnown RBP19.13■□□□□ 0.65
COL1A1-207ENST00000486572 ZNF165P49910 485 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 RAPGEF1Q13905 1077 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 SKOR2Q2VWA4 1001 aaPredicted RBP19.13■□□□□ 0.65
COL1A1-207ENST00000486572 PM20D1Q6GTS8 502 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 PMF1Q6P1K2 205 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 KLHDC10Q6PID8 442 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 CPA6Q8N4T0 437 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 ZNF606Q8WXB4 792 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 CDK5RAP1Q96SZ6 601 aaKnown RBP19.13■□□□□ 0.65
COL1A1-207ENST00000486572 ACP6Q9NPH0 428 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 PLCB1Q9NQ66 1216 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 MTF2Q9Y483 593 aaPredicted RBP19.13■□□□□ 0.65
COL1A1-207ENST00000486572 FHOD1Q9Y613 1164 aa19.13■□□□□ 0.65
COL1A1-207ENST00000486572 SMTNL1A8MU46 457 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 LGALS16A8MUM7 142 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 SLC9A3R1O14745 358 aaPredicted RBP19.12■□□□□ 0.65
COL1A1-207ENST00000486572 TBX18O95935 607 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 DCNP07585 359 aaKnown RBP19.12■□□□□ 0.65
COL1A1-207ENST00000486572 UCHL3P15374 230 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 RGS7P49802 495 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 YWHAGP61981 247 aaKnown RBP eCLIP19.12■□□□□ 0.65
COL1A1-207ENST00000486572 EML3Q32P44 896 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 C10orf120Q5SQS8 335 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 DHX40Q8IX18 779 aaKnown RBP19.12■□□□□ 0.65
COL1A1-207ENST00000486572 SCML4Q8N228 414 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 ZNF276Q8N554 614 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 HSFY1Q96LI6 401 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 CNGB3Q9NQW8 809 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 DLGAP2Q9P1A6 1054 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 DNMT3LQ9UJW3 386 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 NDRG2Q9UN36 371 aaKnown RBP19.12■□□□□ 0.65
COL1A1-207ENST00000486572 ARIH1Q9Y4X5 557 aaPredicted RBP19.12■□□□□ 0.65
COL1A1-207ENST00000486572 MIA3Q5JRA6 1907 aa19.12■□□□□ 0.65
COL1A1-207ENST00000486572 E2F8A0AVK6 867 aa19.11■□□□□ 0.65
COL1A1-207ENST00000486572 OTOL1A6NHN0 477 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms