RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 SMYD5Q6GMV2 418 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 OTOP3Q7RTS5 596 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 BMP8AQ7Z5Y6 402 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 GPIHBP1Q8IV16 184 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 ZDHHC14Q8IZN3 488 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 FBXL6Q8N531 539 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 CEP120Q8N960 986 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 XXYLT1Q8NBI6 393 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 GRK7Q8WTQ7 553 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 PGM2Q96G03 612 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 ACO2Q99798 780 aaKnown RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TTPALQ9BTX7 342 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TMEM109Q9BVC6 243 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TARS2Q9BW92 718 aaKnown RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 CDT1Q9H211 546 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 PABPC3Q9H361 631 aaKnown RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 PLEKHA4Q9H4M7 779 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TMEM134Q9H6X4 195 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 NPDC1Q9NQX5 325 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TOPORSQ9NS56 1045 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 HOMER3Q9NSC5 361 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 BCCIPQ9P287 314 aaKnown RBP eCLIP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 ARHGAP28Q9P2N2 729 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 PCYOX1Q9UHG3 505 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 AMACRQ9UHK6 382 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 CITO14578 2027 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 MTCL1Q9Y4B5 1905 aaKnown RBP9.49□□□□□ -0.89
COL12A1-208ENST00000486533 C5orf60A6NFR6 353 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 DDX3YO15523 660 aaKnown RBP9.49□□□□□ -0.89
COL12A1-208ENST00000486533 B3GAT3O94766 335 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 PLS3P13797 630 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 ABCB4P21439 1286 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 CTNNA2P26232 953 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 ECHS1P30084 290 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 GTF2H1P32780 548 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 SMTNP53814 917 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 MRPS25P82663 173 aaKnown RBP9.49□□□□□ -0.89
COL12A1-208ENST00000486533 ELAVL2Q12926 359 aaKnown RBP9.49□□□□□ -0.89
COL12A1-208ENST00000486533 PSMD5Q16401 504 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 SWT1Q5T5J6 900 aaKnown RBP9.49□□□□□ -0.89
COL12A1-208ENST00000486533 DUPD1Q68J44 220 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 TAS1R3Q7RTX0 852 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 CCDC91Q7Z6B0 441 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 CPLX4Q7Z7G2 160 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 GPR65Q8IYL9 337 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 UBALD2Q8IYN6 164 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 TTC13Q8NBP0 860 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 BBOF1Q8ND07 529 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 CMASQ8NFW8 434 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-208ENST00000486533 SMG7Q92540 1137 aaKnown RBP9.49□□□□□ -0.89
COL12A1-208ENST00000486533 CYFIP2Q96F07 1278 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 ASIC4Q96FT7 647 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 ZSWIM1Q9BR11 485 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 SYT11Q9BT88 431 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 ROPN1BQ9BZX4 212 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-208ENST00000486533 SMOC2Q9H3U7 446 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 YY1AP1Q9H869 796 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 ROPN1Q9HAT0 212 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-208ENST00000486533 PIDD1Q9HB75 910 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 GOLGA2P5Q9HBQ8 144 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 FNIP2Q9P278 1114 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 ANKFY1Q9P2R3 1169 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL12A1-208ENST00000486533 NFS1Q9Y697 457 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 CAPN7Q9Y6W3 813 aa9.49□□□□□ -0.89
COL12A1-208ENST00000486533 CLUHO75153 1309 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 VWA8A3KMH1 1905 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 MYO1FO00160 1098 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 RGS16O15492 202 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-208ENST00000486533 MYBL1P10243 752 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 GBP2P32456 591 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-208ENST00000486533 CETN2P41208 172 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 GRM5P41594 1212 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 MXI1P50539 228 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 PDE6CP51160 858 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 CLCNKBP51801 687 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 BPIFB4P59827 614 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 KCNC4Q03721 635 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 ACTN3Q08043 901 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-208ENST00000486533 MPZL3Q6UWV2 235 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 TRMT10CQ7L0Y3 403 aaKnown RBP9.48□□□□□ -0.89
COL12A1-208ENST00000486533 JAMLQ86YT9 394 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 KCNV2Q8TDN2 545 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 SPIRE2Q8WWL2 714 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 TLCD1Q96CP7 247 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 UROC1Q96N76 676 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 ACAP3Q96P50 834 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 PPP1R10Q96QC0 940 aaKnown RBP9.48□□□□□ -0.89
COL12A1-208ENST00000486533 HINFPQ9BQA5 517 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 KCNH6Q9H252 994 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 DPH5Q9H2P9 285 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 PTPRHQ9HD43 1115 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 SAMD15Q9P1V8 674 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 SLC12A6Q9UHW9 1150 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 GTF3C4Q9UKN8 822 aa9.48□□□□□ -0.89
COL12A1-208ENST00000486533 NOVA2Q9UNW9 492 aaKnown RBP9.48□□□□□ -0.89
COL12A1-208ENST00000486533 MYO15AQ9UKN7 3530 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 SMIM28A0A1B0GU29 152 aa9.47□□□□□ -0.89
COL12A1-208ENST00000486533 KIAA0391O15091 583 aaKnown RBP9.47□□□□□ -0.89
COL12A1-208ENST00000486533 SPOPO43791 374 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms