RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 KCTD13Q8WZ19 329 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 DDX1Q92499 740 aaKnown RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 FBXO32Q969P5 355 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 SPATA17Q96L03 361 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 C8orf48Q96LL4 319 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 CDK5RAP1Q96SZ6 601 aaKnown RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 RTP3Q9BQQ7 232 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 C11orf70Q9BRQ4 267 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 VN1R3Q9BXE9 311 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 ISCUQ9H1K1 167 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 CSNK1G1Q9HCP0 422 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 CNGB3Q9NQW8 809 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 TLR8Q9NR97 1041 aaKnown RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 DZANK1Q9NVP4 752 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 TMEM51Q9NW97 253 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 DLL3Q9NYJ7 618 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 CNOT8Q9UFF9 292 aaKnown RBP7.31□□□□□ -1.24
UBR4-214ENST00000486515 INSL5Q9Y5Q6 135 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBR4-214ENST00000486515 KIAA1671Q9BY89 1806 aa7.31□□□□□ -1.24
UBR4-214ENST00000486515 BPTFQ12830 3046 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 TTC3P53804 2025 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 CYSRT1A8MQ03 144 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 HIDE1A8MVS5 230 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 E5RJQ4 531 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 MYO1FO00160 1098 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 ZNF197O14709 1029 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 FSCN2O14926 492 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 PER2O15055 1255 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 KIF5CO60282 957 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 TBC1D4O60343 1298 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 RNF8O76064 485 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 ABLIM3O94929 683 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 EFEMP2O95967 443 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 ZBED1O96006 694 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 CALCAP01258 141 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 C8AP07357 584 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 HNRNPA1P09651 372 aaKnown RBP eCLIP7.3□□□□□ -1.24
UBR4-214ENST00000486515 LINC00271P0C7V0 271 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 SPATA31D3P0C874 917 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 CHRNB2P17787 502 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 FECHP22830 423 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 MMP8P22894 467 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 YWHAQP27348 245 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 AVPR2P30518 371 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 GBP1P32455 592 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 CDH5P33151 784 aaPredicted RBP7.3□□□□□ -1.24
UBR4-214ENST00000486515 SSR1P43307 286 aaKnown RBP7.3□□□□□ -1.24
UBR4-214ENST00000486515 CLCN4P51793 760 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 GALCP54803 685 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 RNASE9P60153 205 aaKnown RBP7.3□□□□□ -1.24
UBR4-214ENST00000486515 CCZ1BP86790 482 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 CCZ1P86791 482 aaPredicted RBP7.3□□□□□ -1.24
UBR4-214ENST00000486515 DMWDQ09019 674 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 ADIGQ0VDE8 80 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 TWF1Q12792 350 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 PUS10Q3MIT2 529 aaKnown RBP7.3□□□□□ -1.24
UBR4-214ENST00000486515 ARHGAP15Q53QZ3 475 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 ZFYVE27Q5T4F4 411 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 E4F1Q66K89 784 aaPredicted RBP7.3□□□□□ -1.24
UBR4-214ENST00000486515 CES5AQ6NT32 575 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 PMF1Q6P1K2 205 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 RSPO2Q6UXX9 243 aaPredicted RBP7.3□□□□□ -1.24
UBR4-214ENST00000486515 RAD9BQ6WBX8 426 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 SPATA31D4Q6ZUB0 917 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 KIAA2013Q8IYS2 634 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 LEMD2Q8NC56 503 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 GIPC2Q8TF65 315 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 IRGQQ8WZA9 623 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 CPXM1Q96SM3 734 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 KCNK16Q96T55 309 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 NCAPGQ9BPX3 1015 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 LPIN3Q9BQK8 851 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 DESI2Q9BSY9 194 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 LZTFL1Q9NQ48 299 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 MAN1C1Q9NR34 630 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 ASAH2Q9NR71 780 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 TMLHEQ9NVH6 421 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 ZDHHC7Q9NXF8 308 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 TRMT1Q9NXH9 659 aaKnown RBP7.3□□□□□ -1.24
UBR4-214ENST00000486515 TRPM5Q9NZQ8 1165 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 UVRAGQ9P2Y5 699 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 STAP1Q9ULZ2 295 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 PPP2R2CQ9Y2T4 447 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 YIPF1Q9Y548 306 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 PAXBP1Q9Y5B6 917 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 TECTAO75443 2155 aa7.3□□□□□ -1.24
UBR4-214ENST00000486515 EP300Q09472 2414 aaPredicted RBP7.3□□□□□ -1.24
UBR4-214ENST00000486515 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.29□□□□□ -1.24
UBR4-214ENST00000486515 FAM170AA1A519 330 aa7.29□□□□□ -1.24
UBR4-214ENST00000486515 MACROD2A1Z1Q3 448 aa7.29□□□□□ -1.24
UBR4-214ENST00000486515 EPOPA6NHQ4 379 aa7.29□□□□□ -1.24
UBR4-214ENST00000486515 C19orf67A6NJJ6 358 aa7.29□□□□□ -1.24
UBR4-214ENST00000486515 SLC38A8A6NNN8 435 aa7.29□□□□□ -1.24
UBR4-214ENST00000486515 PIK3R2O00459 728 aa7.29□□□□□ -1.24
UBR4-214ENST00000486515 ADAM12O43184 909 aa7.29□□□□□ -1.24
UBR4-214ENST00000486515 LILRB3O75022 631 aa7.29□□□□□ -1.24
UBR4-214ENST00000486515 HSF2BPO75031 334 aa7.29□□□□□ -1.24
UBR4-214ENST00000486515 CLASP2O75122 1294 aaKnown RBP7.29□□□□□ -1.24
UBR4-214ENST00000486515 ARHGEF15O94989 841 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms