RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 CTSKP43235 329 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 TAF6P49848 677 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 TPMTP51580 245 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 TOB2Q14106 344 aaPredicted RBP10.34□□□□□ -0.75
PTPN7-213ENST00000486116 UBAP2LQ14157 1087 aaKnown RBP10.34□□□□□ -0.75
PTPN7-213ENST00000486116 FUT11Q495W5 492 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 BTBD8Q5XKL5 378 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 GATAD2AQ86YP4 633 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 SCN4BQ8IWT1 228 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 DHX40Q8IX18 779 aaKnown RBP10.34□□□□□ -0.75
PTPN7-213ENST00000486116 EXD3Q8N9H8 876 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 KCNB2Q92953 911 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 CNDP2Q96KP4 475 aaKnown RBP10.34□□□□□ -0.75
PTPN7-213ENST00000486116 TSPAN18Q96SJ8 248 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 MKRN2Q9H000 416 aaKnown RBP10.34□□□□□ -0.75
PTPN7-213ENST00000486116 RPF1Q9H9Y2 349 aaKnown RBP10.34□□□□□ -0.75
PTPN7-213ENST00000486116 TM9SF3Q9HD45 589 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 SSUH2Q9Y2M2 353 aa10.34□□□□□ -0.75
PTPN7-213ENST00000486116 ZNF840PA6NDX5 716 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 KLK10O43240 276 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 OAS1P00973 400 aaKnown RBP10.33□□□□□ -0.76
PTPN7-213ENST00000486116 IGLV3-19P01714 112 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 MAPTP10636 758 aaKnown RBP10.33□□□□□ -0.76
PTPN7-213ENST00000486116 MYF5P13349 255 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 CR2P20023 1033 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 GLDCP23378 1020 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 MATR3P43243 847 aaKnown RBP eCLIP10.33□□□□□ -0.76
PTPN7-213ENST00000486116 GRIA4P48058 902 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 STRN3Q13033 797 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 CFAP221Q4G0U5 840 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 C4orf17Q53FE4 359 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 INTS6LQ5JSJ4 861 aaKnown RBP10.33□□□□□ -0.76
PTPN7-213ENST00000486116 GRAMD4Q6IC98 578 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 TMEM25Q86YD3 366 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 CACTIN-AS1Q8N1I8 211 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 DCBLD1Q8N8Z6 715 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 KCNE4Q8WWG9 221 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 SNX19Q92543 992 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 ZNF578Q96N58 590 aaPredicted RBP10.33□□□□□ -0.76
PTPN7-213ENST00000486116 TRPM5Q9NZQ8 1165 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 TBC1D14Q9P2M4 693 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 GTF3C4Q9UKN8 822 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 SNX14Q9Y5W7 946 aa10.33□□□□□ -0.76
PTPN7-213ENST00000486116 COL27A1Q8IZC6 1860 aaPredicted RBP10.33□□□□□ -0.76
PTPN7-213ENST00000486116 A0A1B0GTQ1 180 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 ENO4A6NNW6 628 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 SFI1A8K8P3 1242 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 GFRA2O00451 464 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 HCRTO43612 131 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 AFPP02771 609 aaKnown RBP10.32□□□□□ -0.76
PTPN7-213ENST00000486116 OXTRP30559 389 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 CCR10P46092 362 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 SERINC3Q13530 473 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 TMEM132DQ14C87 1099 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 TEAD4Q15561 434 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 ANO4Q32M45 955 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 DIEXFQ68CQ4 756 aaKnown RBP10.32□□□□□ -0.76
PTPN7-213ENST00000486116 ATG14Q6ZNE5 492 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 NUDT18Q6ZVK8 323 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 BBS7Q8IWZ6 715 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 PDCL2Q8N4E4 241 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 TMEM161BQ8NDZ6 487 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 ERMNQ8TAM6 284 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 RFFLQ8WZ73 363 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 ACBD6Q9BR61 282 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 LARP6Q9BRS8 491 aaKnown RBP10.32□□□□□ -0.76
PTPN7-213ENST00000486116 NTPCRQ9BSD7 190 aaKnown RBP10.32□□□□□ -0.76
PTPN7-213ENST00000486116 RUSC1Q9BVN2 902 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 TRIM9Q9C026 710 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 C6orf106Q9H6K1 298 aaPredicted RBP10.32□□□□□ -0.76
PTPN7-213ENST00000486116 OSGEPQ9NPF4 335 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 SPHK2Q9NRA0 654 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 DNAJC17Q9NVM6 304 aaKnown RBP10.32□□□□□ -0.76
PTPN7-213ENST00000486116 DDX43Q9NXZ2 648 aaKnown RBP10.32□□□□□ -0.76
PTPN7-213ENST00000486116 HSPBP1Q9NZL4 362 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 CLCA2Q9UQC9 943 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 PAXBP1Q9Y5B6 917 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 PCDHB6Q9Y5E3 794 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 PCDHB1Q9Y5F3 818 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 SPTBN1Q01082 2364 aaKnown RBP10.32□□□□□ -0.76
PTPN7-213ENST00000486116 FBN2P35556 2912 aa10.32□□□□□ -0.76
PTPN7-213ENST00000486116 C2CD3Q4AC94 2353 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 KPNA7A9QM74 516 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 K7ENP7 123 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 OGTO15294 1046 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 SUV39H1O43463 412 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 MBL2P11226 248 aaPredicted RBP10.31□□□□□ -0.76
PTPN7-213ENST00000486116 MUTP22033 750 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 KRT2P35908 639 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 MAGEA11P43364 429 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 INSM1Q01101 510 aaPredicted RBP10.31□□□□□ -0.76
PTPN7-213ENST00000486116 STK3Q13188 491 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 SHBQ15464 509 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 INO80CQ6PI98 192 aaPredicted RBP10.31□□□□□ -0.76
PTPN7-213ENST00000486116 FAM124AQ86V42 546 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 OSTM1Q86WC4 334 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 DDX42Q86XP3 938 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTPN7-213ENST00000486116 CACUL1Q86Y37 369 aa10.31□□□□□ -0.76
PTPN7-213ENST00000486116 SPATA2LQ8IUW3 424 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms