RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 SCAMP3O14828 347 aaKnown RBP19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 CNR2P34972 360 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 OPRD1P41143 372 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 FMO5P49326 533 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 UBE2HP62256 183 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 CUL2Q13617 745 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 GAB4Q2WGN9 574 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 ARHGAP17Q68EM7 881 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 CCDC26Q8TAB7 109 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 EZH1Q92800 747 aaPredicted RBP19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 CYLDQ9NQC7 956 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 SLC8A2Q9UPR5 921 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 USP3Q9Y6I4 520 aa19.42■□□□□ 0.7
PRPF40A-209ENST00000486100 FAM186AA6NE01 2351 aa19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 FANCMQ8IYD8 2048 aa19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 CYP26A1O43174 497 aa19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 HRO43593 1189 aa19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 TBX18O95935 607 aa19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 ATP5C1P36542 298 aaKnown RBP19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 YWHAEP62258 255 aaKnown RBP19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 HEATR6Q6AI08 1181 aaKnown RBP19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 WDR5BQ86VZ2 330 aa19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 NMUR1Q9HB89 426 aa19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 OSER1Q9NX31 292 aa19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 NCDNQ9UBB6 729 aa19.41■□□□□ 0.7
PRPF40A-209ENST00000486100 A0A1W2PQH9 124 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 ADH1CP00326 375 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 TBXAS1P24557 533 aaPredicted RBP19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 HOXC13P31276 330 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 PSEN1P49768 467 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 LRMPQ12912 555 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 KLHDC10Q6PID8 442 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 CCDC186Q7Z3E2 898 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 ZNF276Q8N554 614 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 TRIML1Q8N9V2 468 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 ANKRD52Q8NB46 1076 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 RPLP0P6Q8NHW5 317 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 SECISBP2LQ93073 1101 aaKnown RBP19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 KLF16Q9BXK1 252 aaPredicted RBP19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 KIAA1468Q9P260 1216 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 RAB23Q9ULC3 237 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 CTNND2Q9UQB3 1225 aa19.4■□□□□ 0.7
PRPF40A-209ENST00000486100 CFAP54Q96N23 3096 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 CCDC163A0A0D9SF12 145 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 K7EQS6 105 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 P4HA2O15460 535 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 GNA14O95837 355 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 RARGP13631 454 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 EIF2DP41214 584 aaKnown RBP19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 SLC6A11P48066 632 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 STX17P56962 302 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 SLC8A3P57103 927 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 GAD2Q05329 585 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 CETN1Q12798 172 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 PAK1Q13153 545 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 SIM2Q14190 667 aaPredicted RBP19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 LY6G5CQ5SRR4 150 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 HTR3DQ70Z44 454 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 SYT13Q7L8C5 426 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 SCD5Q86SK9 330 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 KIAA2013Q8IYS2 634 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 CAMKK1Q8N5S9 505 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 WBP2Q969T9 261 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 PNKPQ96T60 521 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 KIAA1257Q9ULG3 409 aa19.39■□□□□ 0.69
PRPF40A-209ENST00000486100 A0A0A0MRY4 1105 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 GREM1O60565 184 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 IRF1P10914 325 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 ADH5P11766 374 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 PLA2G4AP47712 749 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 GOLGA8FQ08AF8 430 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 GOLGA8DPQ0D2H9 430 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 CAMK4Q16566 473 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 RAB41Q5JT25 222 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 PRR23BQ6ZRT6 265 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 TADA2BQ86TJ2 420 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 PIGZQ86VD9 579 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 BBS7Q8IWZ6 715 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 GPR161Q8N6U8 529 aaKnown RBP19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 UBR7Q8N806 425 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 LMO3Q8TAP4 145 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 ACDQ96AP0 544 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 NT5C1BQ96P26 610 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 SRRTQ9BXP5 876 aaKnown RBP19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 POLR3BQ9NW08 1133 aaPredicted RBP19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 CLIC5Q9NZA1 410 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 DNMT3LQ9UJW3 386 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 NAGPAQ9UK23 515 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 GMEB2Q9UKD1 530 aa19.38■□□□□ 0.69
PRPF40A-209ENST00000486100 RALAP11233 206 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 VDRP11473 427 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 PXNP49023 591 aaPredicted RBP19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 MARSP56192 900 aaKnown RBP19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 KCNH2Q12809 1159 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 SRSF5Q13243 272 aaKnown RBP19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 SGO2Q562F6 1265 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 C10orf120Q5SQS8 335 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 LAIR1Q6GTX8 287 aa19.37■□□□□ 0.69
PRPF40A-209ENST00000486100 TTC30AQ86WT1 665 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms