RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 GCNT1Q02742 428 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 DGKKQ5KSL6 1271 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 CCDC186Q7Z3E2 898 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 RBBP8NLQ8NC74 664 aaPredicted RBP19.4■□□□□ 0.7
COL1A1-206ENST00000485870 THAP9Q9H5L6 903 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 NAGPAQ9UK23 515 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 R4GN57 208 aa19.4■□□□□ 0.7
COL1A1-206ENST00000485870 ATG2BQ96BY7 2078 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 RNF225M0QZC1 329 aaPredicted RBP19.39■□□□□ 0.69
COL1A1-206ENST00000485870 O00370 1275 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 SLC9A3R1O14745 358 aaPredicted RBP19.39■□□□□ 0.69
COL1A1-206ENST00000485870 CALCAP01258 141 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 PAEPP09466 180 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 RARGP13631 454 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 ERCC5P28715 1186 aaPredicted RBP19.39■□□□□ 0.69
COL1A1-206ENST00000485870 PDE4CQ08493 712 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 BST2Q10589 180 aaKnown RBP19.39■□□□□ 0.69
COL1A1-206ENST00000485870 GRSF1Q12849 480 aaKnown RBP eCLIP19.39■□□□□ 0.69
COL1A1-206ENST00000485870 NR1H3Q13133 447 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 CCINQ13939 588 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 GAS6Q14393 721 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 HSP90AA4PQ58FG1 418 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 FSTL4Q6MZW2 842 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 TSSK4Q6SA08 328 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 SCD5Q86SK9 330 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 UBA3Q8TBC4 463 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 TFAP2BQ92481 460 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 KREMEN1Q96MU8 473 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 IER2Q9BTL4 223 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 UBXN6Q9BZV1 441 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 CYLDQ9NQC7 956 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 NUDT5Q9UKK9 219 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 FBXO4Q9UKT5 387 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 KIAA1257Q9ULG3 409 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 SH3BP1Q9Y3L3 701 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 USP3Q9Y6I4 520 aa19.39■□□□□ 0.69
COL1A1-206ENST00000485870 E2F8A0AVK6 867 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 TRDMT1O14717 391 aaKnown RBP19.38■□□□□ 0.69
COL1A1-206ENST00000485870 XPO1O14980 1071 aaKnown RBP19.38■□□□□ 0.69
COL1A1-206ENST00000485870 MDM4O15151 490 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 BRD2P25440 801 aaKnown RBP19.38■□□□□ 0.69
COL1A1-206ENST00000485870 ATP5C1P36542 298 aaKnown RBP19.38■□□□□ 0.69
COL1A1-206ENST00000485870 GALK1P51570 392 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 TMEM196Q5HYL7 178 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 RAB41Q5JT25 222 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 C10orf120Q5SQS8 335 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 FAM114A1Q8IWE2 563 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 KIAA1958Q8N8K9 716 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 WBP2Q969T9 261 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 P2RY13Q9BPV8 354 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 FBRSL1Q9HCM7 1045 aaKnown RBP19.38■□□□□ 0.69
COL1A1-206ENST00000485870 UBE2TQ9NPD8 197 aaPredicted RBP19.38■□□□□ 0.69
COL1A1-206ENST00000485870 PRMT8Q9NR22 394 aaPredicted RBP19.38■□□□□ 0.69
COL1A1-206ENST00000485870 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.38■□□□□ 0.69
COL1A1-206ENST00000485870 MYOFQ9NZM1 2061 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 USP34Q70CQ2 3546 aa19.38■□□□□ 0.69
COL1A1-206ENST00000485870 PROB1E7EW31 1015 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 EGFP01133 1207 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 CYP17A1P05093 508 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 KRT5P13647 590 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 CCR3P51677 355 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 TKTL1P51854 596 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 GJB7Q6PEY0 223 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 TRIM65Q6PJ69 517 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 LCLAT1Q6UWP7 414 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 GBP6Q6ZN66 633 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 CD101Q93033 1021 aa19.37■□□□□ 0.69
COL1A1-206ENST00000485870 KLF16Q9BXK1 252 aaPredicted RBP19.37■□□□□ 0.69
COL1A1-206ENST00000485870 M0QYV0 167 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 GFRA3O60609 400 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 SETSIPP0DME0 302 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 RALAP11233 206 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 SLC9A1P19634 815 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 PSEN1P49768 467 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 ZNF132P52740 706 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 SATB1Q01826 763 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 APBA1Q02410 837 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 DHCR24Q15392 516 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 MAN2A1Q16706 1144 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 EXOC3L4Q17RC7 722 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 ZNF528Q3MIS6 628 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 ZC3H14Q6PJT7 736 aaKnown RBP19.36■□□□□ 0.69
COL1A1-206ENST00000485870 BBS7Q8IWZ6 715 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 ADGRG2Q8IZP9 1017 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 SPEM1Q8N4L4 309 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 NDRG1Q92597 394 aaKnown RBP19.36■□□□□ 0.69
COL1A1-206ENST00000485870 NKD2Q969F2 451 aaPredicted RBP19.36■□□□□ 0.69
COL1A1-206ENST00000485870 EXOC4Q96A65 974 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 ZSWIM1Q9BR11 485 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 ULBP1Q9BZM6 244 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 LRRC4Q9HBW1 653 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 TBC1D14Q9P2M4 693 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 DNMT3LQ9UJW3 386 aa19.36■□□□□ 0.69
COL1A1-206ENST00000485870 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.36■□□□□ 0.69
COL1A1-206ENST00000485870 RIF1Q5UIP0 2472 aaKnown RBP19.36■□□□□ 0.69
COL1A1-206ENST00000485870 FANCMQ8IYD8 2048 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 ZBED1O96006 694 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 PRKCSHP14314 528 aaPredicted RBP19.35■□□□□ 0.69
COL1A1-206ENST00000485870 DRD1P21728 446 aa19.35■□□□□ 0.69
COL1A1-206ENST00000485870 PLA2G4AP47712 749 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms