RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 PTGER3P43115 390 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 CFHR1Q03591 330 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 NCBP1Q09161 790 aaKnown RBP5.87□□□□□ -1.47
PTPN4-210ENST00000485247 LAMTOR4Q0VGL1 99 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 TWF1Q12792 350 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 HNRNPDQ14103 355 aaKnown RBP5.87□□□□□ -1.47
PTPN4-210ENST00000485247 DMC1Q14565 340 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 MAPK6Q16659 721 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 ITPRIPL2Q3MIP1 535 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 ARHGAP29Q52LW3 1261 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 TMEM196Q5HYL7 178 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 STXBP5Q5T5C0 1151 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 CDKAL1Q5VV42 579 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 SLC6A19Q695T7 634 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 ANKS3Q6ZW76 656 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 SYT13Q7L8C5 426 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 C11orf74Q86VG3 221 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 MCATQ8IVS2 390 aaKnown RBP5.87□□□□□ -1.47
PTPN4-210ENST00000485247 TMEFF1Q8IYR6 380 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 DNAJB8Q8NHS0 232 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 RPLP0P6Q8NHW5 317 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 NCOA7Q8NI08 942 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 PSPC1Q8WXF1 523 aaKnown RBP5.87□□□□□ -1.47
PTPN4-210ENST00000485247 CRYGNQ8WXF5 182 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 GPR88Q9GZN0 384 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 UNC45AQ9H3U1 944 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 ASAH2Q9NR71 780 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 ADAM30Q9UKF2 790 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 INSL5Q9Y5Q6 135 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 BACE2Q9Y5Z0 518 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 TAF6LQ9Y6J9 622 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 THADAQ6YHU6 1953 aa5.87□□□□□ -1.47
PTPN4-210ENST00000485247 TRABD2BA6NFA1 517 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 OTOL1A6NHN0 477 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-210ENST00000485247 CCDC69A6NI79 296 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 E7EWF7 191 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 I3L4J1 428 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 INO80B-WBP1J3KQ70 363 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 PTGESO14684 152 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 TRDMT1O14717 391 aaKnown RBP5.86□□□□□ -1.47
PTPN4-210ENST00000485247 MSH4O15457 936 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 B3GAT3O94766 335 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 THP07101 528 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 CYP21A2P08686 494 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 ARF4P18085 180 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-210ENST00000485247 GARTP22102 1010 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 JAK3P52333 1124 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 EPHA5P54756 1037 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 NPEPPSP55786 919 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 FAM160A1Q05DH4 1040 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 GFPT1Q06210 699 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-210ENST00000485247 PTPAQ15257 358 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 ANO7Q6IWH7 933 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 SLC8B1Q6J4K2 584 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 TOGARAM2Q6ZUX3 1019 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 TMTC3Q6ZXV5 915 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 ANO5Q75V66 913 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 LPCAT2Q7L5N7 544 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 MIER3Q7Z3K6 550 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 SLCO6A1Q86UG4 719 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 TTC30AQ86WT1 665 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 SYT12Q8IV01 421 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 TCEAL8Q8IYN2 117 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 MINDY1Q8N5J2 469 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 LEMD2Q8NC56 503 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 LSM14AQ8ND56 463 aaKnown RBP5.86□□□□□ -1.47
PTPN4-210ENST00000485247 TSTD1Q8NFU3 115 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 BPIFB1Q8TDL5 484 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 RLN3Q8WXF3 142 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 GATAD2BQ8WXI9 593 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 LENG9Q96B70 501 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 CHFRQ96EP1 664 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 CCDC51Q96ER9 411 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 TMEM74Q96NL1 305 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 FCRL3Q96P31 734 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-210ENST00000485247 JPH2Q9BR39 696 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-210ENST00000485247 IL25Q9H293 177 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 CXCL16Q9H2A7 254 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 PRORYQ9H606 182 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 FBRSL1Q9HCM7 1045 aaKnown RBP5.86□□□□□ -1.47
PTPN4-210ENST00000485247 DKK4Q9UBT3 224 aa5.86□□□□□ -1.47
PTPN4-210ENST00000485247 POLR3KQ9Y2Y1 108 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-210ENST00000485247 KALRNO60229 2985 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 ZMYM2Q9UBW7 1377 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 BIN1O00499 593 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 ADAMTS3O15072 1205 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 B4GALT5O43286 388 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 PRAMEF12O95522 483 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 BRCC3P46736 316 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 GALK1P51570 392 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 RUNX3Q13761 415 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 LRCH2Q5VUJ6 765 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 NAIF1Q69YI7 327 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-210ENST00000485247 TRIM68Q6AZZ1 485 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 SLC27A1Q6PCB7 646 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 CASC1Q6TDU7 716 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 FERMT3Q86UX7 667 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 TEX2Q8IWB9 1127 aa5.85□□□□□ -1.47
PTPN4-210ENST00000485247 MB21D2Q8IYB1 491 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-210ENST00000485247 DEFB119Q8N690 84 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms