RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 XXYLT1Q8NBI6 393 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 ZNF516Q92618 1163 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 HPS3Q969F9 1004 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 SYAP1Q96A49 352 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-227ENST00000485102 C7orf25Q9BPX7 421 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 DPEP3Q9H4B8 488 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 DEC1Q9P2X7 70 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 SLC6A14Q9UN76 642 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 NEUROG3Q9Y4Z2 214 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 BAHCC1Q9P281 2608 aa13.82□□□□□ -0.2
HDAC6-227ENST00000485102 WDFY3Q8IZQ1 3526 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 TBC1D3BA6NDS4 549 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 CLDN5O00501 218 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 AP5Z1O43299 807 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 PPP6R2O75170 966 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 AP3M2P53677 418 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 CLDN10P78369 228 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 DUOXA1Q1HG43 343 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 BMT2Q1RMZ1 405 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 UAP1L1Q3KQV9 507 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 FAM26FQ5R3K3 315 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 BTBD8Q5XKL5 378 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 HTR3DQ70Z44 454 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 TERB1Q8NA31 727 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 RDH13Q8NBN7 331 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 LINC00301Q8NCQ3 95 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 DEFB124Q8NES8 71 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 TMEM174Q8WUU8 243 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 SCFD1Q8WVM8 642 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 HMGB4Q8WW32 186 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 FBXO32Q969P5 355 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 KCNK16Q96T55 309 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 CAPN10Q9HC96 672 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 CD248Q9HCU0 757 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 SPHK2Q9NRA0 654 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 BCCIPQ9P287 314 aaKnown RBP eCLIP13.81□□□□□ -0.2
HDAC6-227ENST00000485102 CHORDC1Q9UHD1 332 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-227ENST00000485102 HCN2Q9UL51 889 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 MTMR6Q9Y217 621 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 MSRB2Q9Y3D2 182 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 SPEGQ15772 3267 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 ATP8B3O60423 1300 aa13.81□□□□□ -0.2
HDAC6-227ENST00000485102 DMXL2Q8TDJ6 3036 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 TCRBV21S2A2A0A5A6 115 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 H0Y626 953 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 TRIM16O95361 564 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 TOP3BO95985 862 aaKnown RBP13.8□□□□□ -0.2
HDAC6-227ENST00000485102 SERPINF2P08697 491 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 ITPKAP23677 461 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 NTSR1P30989 418 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 MYL6P60660 151 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 TRPC3Q13507 836 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 HNRNPDQ14103 355 aaKnown RBP13.8□□□□□ -0.2
HDAC6-227ENST00000485102 TTC30AQ86WT1 665 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 ZNF513Q8N8E2 541 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-227ENST00000485102 IQUBQ8NA54 791 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 SCAMP5Q8TAC9 235 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 CCDC127Q96BQ5 260 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 TNIP3Q96KP6 325 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 MAGEF1Q9HAY2 307 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 CSNK1G1Q9HCP0 422 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 DMAP1Q9NPF5 467 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-227ENST00000485102 SH3BP1Q9Y3L3 701 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 KNL1Q8NG31 2342 aa13.8□□□□□ -0.2
HDAC6-227ENST00000485102 AKAP13Q12802 2813 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 A0A1W2PQD8 194 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 A0A1W2PQF6 199 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 SCAMP3O14828 347 aaKnown RBP13.79□□□□□ -0.2
HDAC6-227ENST00000485102 CLIC2O15247 247 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 GREM1O60565 184 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 ZNF217O75362 1048 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 GABRG2P18507 467 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 SPINK2P20155 84 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 SLC5A3P53794 718 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 ASIC1P78348 528 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 KDSRQ06136 332 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 UNC13DQ70J99 1090 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 FAM35AQ86V20 835 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 TMEM25Q86YD3 366 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 BBS7Q8IWZ6 715 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 FUKQ8N0W3 1084 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 CRYBG2Q8N1P7 616 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 PGBD3Q8N328 593 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 SMARCD1Q96GM5 515 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 FBXO44Q9H4M3 255 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 CCSER2Q9H7U1 834 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 MARK1Q9P0L2 795 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 NXF1Q9UBU9 619 aaKnown RBP13.79□□□□□ -0.2
HDAC6-227ENST00000485102 PCDH15Q96QU1 1955 aa13.79□□□□□ -0.2
HDAC6-227ENST00000485102 ANKRD11Q6UB99 2663 aaPredicted RBP13.79□□□□□ -0.2
HDAC6-227ENST00000485102 ACACAQ13085 2346 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 PVALEFA0A1B0GWK0 134 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 SRRM3A6NNA2 597 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-227ENST00000485102 GFRA2O00451 464 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 SPTLC2O15270 562 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 CACNG3O60359 315 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 C4BPAP04003 597 aaKnown RBP13.78□□□□□ -0.2
HDAC6-227ENST00000485102 CYP2J2P51589 502 aa13.78□□□□□ -0.2
HDAC6-227ENST00000485102 GFPT1Q06210 699 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-227ENST00000485102 ZNF33AQ06730 810 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms