RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 NEK8Q86SG6 692 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 FAM228AQ86W67 206 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 C1orf127Q8N9H9 656 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 FAM13CQ8NE31 585 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 CMASQ8NFW8 434 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 SPPL3Q8TCT6 385 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 KRT35Q92764 455 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 ZUFSPQ96AP4 578 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 TTPALQ9BTX7 342 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 MS4A5Q9H3V2 200 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 AGO3Q9H9G7 860 aaKnown RBP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 RPS6KA6Q9UK32 745 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 TRIOBPQ9H2D6 2365 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 LCHNA4D1U4 455 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 LOC730098B7Z3J9 87 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 CLASP2O75122 1294 aaKnown RBP5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ERAL1O75616 437 aaKnown RBP5.62□□□□□ -1.51
CCDC39-205ENST00000485055 CYP2A6P11509 494 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ALAS2P22557 587 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ARL2P36404 184 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 PMS2P11Q13670 270 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 LRRC32Q14392 662 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 DGKKQ5KSL6 1271 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 CCDC183Q5T5S1 534 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ISLR2Q6UXK2 745 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ZNF783Q6ZMS7 281 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 CCDC186Q7Z3E2 898 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 VWA5B2Q8N398 1253 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ZBTB44Q8NCP5 570 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 NSUN7Q8NE18 718 aaKnown RBP5.62□□□□□ -1.51
CCDC39-205ENST00000485055 TBCKQ8TEA7 893 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 DNAJB3Q8WWF6 145 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 MAELQ96JY0 434 aaKnown RBP5.62□□□□□ -1.51
CCDC39-205ENST00000485055 SLC2A13Q96QE2 648 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 UBE2ZQ9H832 354 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-205ENST00000485055 HPS4Q9NQG7 708 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 GJB4Q9NTQ9 266 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 EVA1BQ9NVM1 165 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 H2AFY2Q9P0M6 372 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-205ENST00000485055 PLAGL2Q9UPG8 496 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 TRAV20A0A0B4J274 112 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 hCG_1807616A0A1W2PRN6 198 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ARHGAP10A1A4S6 786 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 EML1O00423 815 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ACKR2O00590 384 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 IRAK2O43187 625 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ENDOD1O94919 500 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 FSBPO95073 299 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 MYOGP15173 224 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 TFEBP19484 476 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ACSL1P33121 698 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 PPP5CP53041 499 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 STARD3Q14849 445 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 TSTQ16762 297 aaKnown RBP5.62□□□□□ -1.51
CCDC39-205ENST00000485055 DUSP6Q16828 381 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ARHGAP11AQ6P4F7 1023 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ECHDC2Q86YB7 292 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 C4orf32Q8N8J7 132 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 SPC24Q8NBT2 197 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 KCTD6Q8NC69 237 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 ARL8AQ96BM9 186 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 LRFN3Q9BTN0 628 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 VPS37BQ9H9H4 285 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 NOC2LQ9Y3T9 749 aaKnown RBP5.62□□□□□ -1.51
CCDC39-205ENST00000485055 PLXNA3P51805 1871 aa5.62□□□□□ -1.51
CCDC39-205ENST00000485055 RHPN2P1A8MT19 583 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 LACTBL1A8MY62 500 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 KIF2AO00139 706 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 SIN3BO75182 1162 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 KRT38O76015 456 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 LARGE1O95461 756 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 PDHA1P08559 390 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 JUPP14923 745 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 HOXB8P17481 243 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 TLX1P31314 330 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 TIE1P35590 1138 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 LTBRP36941 435 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 QARSP47897 775 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 LRMPQ12912 555 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 GPM6BQ13491 265 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 LRP8Q14114 963 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 MXD4Q14582 209 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 TRIM61Q5EBN2 209 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 HERC4Q5GLZ8 1057 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 UTP14CQ5TAP6 766 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 LRCH2Q5VUJ6 765 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 PEAR1Q5VY43 1037 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 IZUMO3Q5VZ72 239 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 RFX8Q6ZV50 586 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 B4GALNT4Q76KP1 1039 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 CMTR1Q8N1G2 835 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 COLGALT1Q8NBJ5 622 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 SUN5Q8TC36 379 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 KIAA1524Q8TCG1 905 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 MAML1Q92585 1016 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 GLG1Q92896 1179 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 IPO9Q96P70 1041 aaKnown RBP5.61□□□□□ -1.51
CCDC39-205ENST00000485055 LRRC2Q9BYS8 371 aa5.61□□□□□ -1.51
CCDC39-205ENST00000485055 C2orf40Q9H1Z8 148 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms