RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 CCDC40Q4G0X9 1142 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 TCERG1LQ5VWI1 586 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 KRT39Q6A163 491 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 TTI2Q6NXR4 508 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 PAOXQ6QHF9 649 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 FRMD5Q7Z6J6 570 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 TCEAL8Q8IYN2 117 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 PDCL2Q8N4E4 241 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 GPT2Q8TD30 523 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 SUSD6Q92537 303 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 EEF2KMTQ96G04 330 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 ACBD6Q9BR61 282 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 PHF7Q9BWX1 381 aaPredicted RBP9.53□□□□□ -0.88
COL8A1-207ENST00000483969 SRRTQ9BXP5 876 aaKnown RBP9.53□□□□□ -0.88
COL8A1-207ENST00000483969 IMPG2Q9BZV3 1241 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 GZF1Q9H116 711 aaPredicted RBP9.53□□□□□ -0.88
COL8A1-207ENST00000483969 SNX25Q9H3E2 840 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 CYP4F11Q9HBI6 524 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 TMEM8AQ9HCN3 771 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 DDX43Q9NXZ2 648 aaKnown RBP9.53□□□□□ -0.88
COL8A1-207ENST00000483969 RWDD2AQ9UIY3 292 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 CTNND2Q9UQB3 1225 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 RALGAPA2Q2PPJ7 1873 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 GBF1Q92538 1859 aa9.53□□□□□ -0.88
COL8A1-207ENST00000483969 LAMA2P24043 3122 aaKnown RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 FAM95CA0A1B0GW59 222 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 WDR27A2RRH5 827 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 GABRDO14764 452 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 TACC1O75410 805 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 RFPL2O75678 378 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 PAPLNO95428 1278 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 LRG1P02750 347 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 F13BP05160 661 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 POU2F2P09086 479 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 FOSL1P15407 271 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 PCSK1P29120 753 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 GNL1P36915 607 aaPredicted RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 GCLMP48507 274 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 TUFMP49411 452 aaKnown RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 STX17P56962 302 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 ADCY1Q08828 1119 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 MTMR3Q13615 1198 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 NFE2Q16621 373 aaPredicted RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 TPD52L1Q16890 204 aaPredicted RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 MSMPQ1L6U9 139 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 SOWAHAQ2M3V2 549 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 ZNF699Q32M78 642 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 ZNF667Q5HYK9 610 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 TDRD10Q5VZ19 366 aaKnown RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 SASS6Q6UVJ0 657 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 ADHFE1Q8IWW8 467 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 ADGRF2Q8IZF7 708 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 ELMOD1Q8N336 334 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 FBXL6Q8N531 539 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 SLC7A14Q8TBB6 771 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 C2orf15Q8WU43 125 aaKnown RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 SMG7Q92540 1137 aaKnown RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 FAM84AQ96KN4 292 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 UHRF1Q96T88 793 aaPredicted RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 DUSP9Q99956 384 aaKnown RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 DNAI2Q9GZS0 605 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 ZCWPW1Q9H0M4 648 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 MMRN2Q9H8L6 949 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 HSFX1Q9UBD0 423 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 FOXD3Q9UJU5 478 aaPredicted RBP9.52□□□□□ -0.89
COL8A1-207ENST00000483969 L1RE1Q9UN81 338 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 NR2E1Q9Y466 385 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 SZT2Q5T011 3432 aa9.52□□□□□ -0.89
COL8A1-207ENST00000483969 VNN1O95497 513 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 HLA-DRAP01903 254 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 TRIM49P0CI25 452 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 TRIM49CP0CI26 452 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 CCDC192P0DO97 292 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 PTPN2P17706 415 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 TRIM21P19474 475 aaKnown RBP9.51□□□□□ -0.89
COL8A1-207ENST00000483969 WARSP23381 471 aaKnown RBP9.51□□□□□ -0.89
COL8A1-207ENST00000483969 ERCC5P28715 1186 aaPredicted RBP9.51□□□□□ -0.89
COL8A1-207ENST00000483969 PIK3CAP42336 1068 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 ALDH1A3P47895 512 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 PPP3CAQ08209 521 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 CETN1Q12798 172 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 DUSP4Q13115 394 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 PLD1Q13393 1074 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 MAPRE1Q15691 268 aaKnown RBP9.51□□□□□ -0.89
COL8A1-207ENST00000483969 SLC39A12Q504Y0 691 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 DCAF17Q5H9S7 520 aaPredicted RBP9.51□□□□□ -0.89
COL8A1-207ENST00000483969 EXOSC6Q5RKV6 272 aaKnown RBP9.51□□□□□ -0.89
COL8A1-207ENST00000483969 HP1BP3Q5SSJ5 553 aaPredicted RBP9.51□□□□□ -0.89
COL8A1-207ENST00000483969 C1orf220Q5T0J3 134 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 CCDC183Q5T5S1 534 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 SCARA3Q6AZY7 606 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 IQCEQ6IPM2 695 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 LIMS2Q7Z4I7 341 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 GJD3Q8N144 294 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 FBXL13Q8NEE6 735 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 OR6B3Q8NGW1 331 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 SPPL2BQ8TCT7 592 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 ACSF2Q96CM8 615 aaPredicted RBP9.51□□□□□ -0.89
COL8A1-207ENST00000483969 FAXDC2Q96IV6 333 aa9.51□□□□□ -0.89
COL8A1-207ENST00000483969 ZNF512Q96ME7 567 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms