RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 UNC5BQ8IZJ1 945 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 SLC15A4Q8N697 577 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 OR5AN1Q8NGI8 311 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 CPT1BQ92523 772 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 DDX17Q92841 729 aaKnown RBP4.9□□□□□ -1.63
PTCD3-214ENST00000483925 TBC1D31Q96DN5 1066 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 JAKMIP1Q96N16 626 aaKnown RBP4.9□□□□□ -1.63
PTCD3-214ENST00000483925 TSPAN18Q96SJ8 248 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 ADOQ96SZ5 270 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 EYA3Q99504 573 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 EDEM3Q9BZQ6 932 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 BRD8Q9H0E9 1235 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 ZBTB26Q9HCK0 441 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 ERVK-5Q9HDB9 667 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 SLC39A2Q9NP94 309 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 SLAMF7Q9NQ25 335 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 CCDC177Q9NQR7 707 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-214ENST00000483925 RLIMQ9NVW2 624 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 TMOD4Q9NZQ9 345 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 NDUFAF4Q9P032 175 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 CFAP97Q9P2B7 532 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 MTRRQ9UBK8 725 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 RASAL2Q9UJF2 1139 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 USP15Q9Y4E8 981 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-214ENST00000483925 PLEKHM1Q9Y4G2 1056 aa4.9□□□□□ -1.63
PTCD3-214ENST00000483925 A0A087WZ62 844 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 LOC102723971A0A1B0GUV8 181 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 SAC3D1A6NKF1 404 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF839A8K0R7 811 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 H0Y858 1186 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 H3BNC9 293 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 GUCY1B2O75343 617 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 KRT38O76015 456 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 MLYCDO95822 493 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 CLEC3BP05452 202 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 XRCC6P12956 609 aaKnown RBP eCLIP4.89□□□□□ -1.631e-7■□□□□ 10
PTCD3-214ENST00000483925 LAMP2P13473 410 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 IL2RBP14784 551 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 TPH1P17752 444 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 COMTP21964 271 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 CRHR1P34998 444 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 RBM5P52756 815 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTCD3-214ENST00000483925 RARSP54136 660 aaKnown RBP4.89□□□□□ -1.63
PTCD3-214ENST00000483925 RPP30P78346 268 aaKnown RBP4.89□□□□□ -1.63
PTCD3-214ENST00000483925 MTM1Q13496 603 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 FHL2Q14192 279 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 USP10Q14694 798 aaKnown RBP4.89□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF568Q3ZCX4 644 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 NRN1LQ496H8 165 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 MIIPQ5JXC2 388 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 ANO7Q6IWH7 933 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 PLBD1Q6P4A8 553 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 RNF207Q6ZRF8 634 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 TAS1R1Q7RTX1 841 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 RASGRP3Q8IV61 690 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 ZGPATQ8N5A5 531 aaKnown RBP4.89□□□□□ -1.63
PTCD3-214ENST00000483925 AOPEPQ8N6M6 819 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 AVL9Q8NBF6 648 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 PCSK9Q8NBP7 692 aaKnown RBP4.89□□□□□ -1.63
PTCD3-214ENST00000483925 OR8H1Q8NGG4 311 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 WDR60Q8WVS4 1066 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 USP6NLQ92738 828 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 EDAQ92838 391 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 FAM120BQ96EK7 910 aaKnown RBP4.89□□□□□ -1.63
PTCD3-214ENST00000483925 CCDC34Q96HJ3 373 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 APOPT1Q96IL0 206 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 MXD3Q9BW11 206 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 RABEP2Q9H5N1 569 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 SPON1Q9HCB6 807 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 SEPT11Q9NVA2 429 aaKnown RBP4.89□□□□□ -1.63
PTCD3-214ENST00000483925 ZSCAN32Q9NX65 697 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 PLA2G3Q9NZ20 509 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 MORF4L1Q9UBU8 362 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 AJAP1Q9UKB5 411 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF215Q9UL58 517 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-214ENST00000483925 DAPP1Q9UN19 280 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 PCDHGB4Q9UN71 923 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 CLCA2Q9UQC9 943 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 LYVE1Q9Y5Y7 322 aa4.89□□□□□ -1.63
PTCD3-214ENST00000483925 C19orf81C9J6K1 198 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 PTGES3LE9PB15 166 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 RAB27BO00194 218 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CCP110O43303 1012 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CCNDBP1O95273 360 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CKBP12277 381 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 PECAM1P16284 738 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 STMN1P16949 149 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 ATP5DP30049 168 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 MAPK4P31152 587 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 GUCY1A2P33402 732 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 SLC11A2P49281 568 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CPT1AP50416 773 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 WNT3AP56704 352 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 RAC3P60763 192 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 TMF1P82094 1093 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 NEXNQ0ZGT2 675 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 LRMPQ12912 555 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 STK4Q13043 487 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 TBCEQ15813 527 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 TMEM266Q2M3C6 531 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms