RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SNRNP25Q9BV90 132 aaKnown RBP13.82□□□□□ -0.2
CPNE1-225ENST00000483495 MAK16Q9BXY0 300 aaKnown RBP13.82□□□□□ -0.2
CPNE1-225ENST00000483495 PCDH18Q9HCL0 1135 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 RGS18Q9NS28 235 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.82□□□□□ -0.2
CPNE1-225ENST00000483495 TPX2Q9ULW0 747 aaKnown RBP13.82□□□□□ -0.2
CPNE1-225ENST00000483495 PTCH2Q9Y6C5 1203 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 A0A1W2PQ45 241 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-225ENST00000483495 A0A1W2PQY0 241 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 SGK1O00141 431 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 DAB1O75553 588 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 TTC4O95801 387 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 POMCP01189 267 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 ODC1P11926 461 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 ETS1P14921 441 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 PECAM1P16284 738 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-225ENST00000483495 CAPN2P17655 700 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 PCSK1P29120 753 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 ADIGQ0VDE8 80 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 KRT81Q14533 505 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 MORF4L2Q15014 288 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 NOMO1Q15155 1222 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 DPYSL2Q16555 572 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 ERMARDQ5T6L9 678 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 SCYL2Q6P3W7 929 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 BNIPLQ7Z465 357 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 CCDC25Q86WR0 208 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 RNF169Q8NCN4 708 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 MYCBPAPQ8TBZ2 947 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 NT5C3BQ969T7 300 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 TLCD1Q96CP7 247 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 PGM2Q96G03 612 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 TRPV6Q9H1D0 765 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 LRRC4CQ9HCJ2 640 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 HMX1Q9NP08 348 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-225ENST00000483495 CENPFP49454 3210 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 MYBPHLA2RUH7 354 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 C9IYK1 514 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 M0QZQ0 153 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 TGM2P21980 687 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 PRMT2P55345 433 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 EIF3EP60228 445 aaKnown RBP13.81□□□□□ -0.2
CPNE1-225ENST00000483495 GPS1Q13098 491 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 MBTPS1Q14703 1052 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 CA9Q16790 459 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 SLC25A52Q3SY17 297 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 ANKRD20A8PQ5CZ79 823 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 ZC3H12AQ5D1E8 599 aaKnown RBP13.81□□□□□ -0.2
CPNE1-225ENST00000483495 RNASEH2BQ5TBB1 312 aaKnown RBP13.81□□□□□ -0.2
CPNE1-225ENST00000483495 SLC9A4Q6AI14 798 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 FAM35AQ86V20 835 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 PQLC3Q8N755 202 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 PCED1BQ96HM7 432 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 SLC2A13Q96QE2 648 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 RTP3Q9BQQ7 232 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 MED10Q9BTT4 135 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 ROPN1BQ9BZX4 212 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-225ENST00000483495 ROPN1Q9HAT0 212 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-225ENST00000483495 KRT82Q9NSB4 513 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 DSEQ9UL01 958 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 SHOC2Q9UQ13 582 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 TIMM13Q9Y5L4 95 aaPredicted RBP13.81□□□□□ -0.2
CPNE1-225ENST00000483495 HTTP42858 3142 aa13.81□□□□□ -0.2
CPNE1-225ENST00000483495 MCF2LO15068 1137 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 B3GAT3O94766 335 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 FBXO21O94952 628 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 EOMESO95936 686 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 L1CAMP32004 1257 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 GDF10P55107 478 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 YWHAZP63104 245 aaKnown RBP13.8□□□□□ -0.2
CPNE1-225ENST00000483495 FAM189BP81408 668 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 RAB41Q5JT25 222 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 PCGF5Q86SE9 256 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 RTN4RL1Q86UN2 441 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-225ENST00000483495 PSTKQ8IV42 348 aaKnown RBP13.8□□□□□ -0.2
CPNE1-225ENST00000483495 PLD5Q8N7P1 536 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 ZMIZ2Q8NF64 920 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 PCDH19Q8TAB3 1148 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 SMOQ99835 787 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 ACBD6Q9BR61 282 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 CAPS2Q9BXY5 557 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 LRRC4Q9HBW1 653 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 GPATCH2LQ9NWQ4 482 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 PHF24Q9UPV7 400 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 FARP1Q9Y4F1 1045 aaPredicted RBP13.8□□□□□ -0.2
CPNE1-225ENST00000483495 DNAH12Q6ZR08 3092 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 RBP3P10745 1247 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 STIP1P31948 543 aaKnown RBP13.8□□□□□ -0.2
CPNE1-225ENST00000483495 NOS2P35228 1153 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 ACTN2P35609 894 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 MAP3K7CLP57077 242 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 ARHGEF6Q15052 776 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 TNFAIP8L3Q5GJ75 292 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 C6orf118Q5T5N4 469 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 FAM171BQ6P995 826 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 DCLRE1AQ6PJP8 1040 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 SLC24A5Q71RS6 500 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 UNC45BQ8IWX7 931 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 DEFB106AQ8N104 65 aa13.8□□□□□ -0.2
CPNE1-225ENST00000483495 SIX6OS1Q8N1H7 587 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms