RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 ARHGAP15Q53QZ3 475 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 FAM183BPQ6ZVS7 135 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 PHLDB2Q86SQ0 1253 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 TMEM110Q86TL2 294 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 PDZD8Q8NEN9 1154 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 ZSWIM3Q96MP5 696 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 PHF7Q9BWX1 381 aaPredicted RBP18.73■□□□□ 0.59
CPNE1-224ENST00000483359 TLR8Q9NR97 1041 aaKnown RBP18.73■□□□□ 0.59
CPNE1-224ENST00000483359 NUDT5Q9UKK9 219 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 DENND4CQ5VZ89 1909 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 ANAPC1Q9H1A4 1944 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 EIF4A3P38919 411 aaKnown RBP18.73■□□□□ 0.59
CPNE1-224ENST00000483359 RPL34P49207 117 aaKnown RBP18.73■□□□□ 0.59
CPNE1-224ENST00000483359 CENPCQ03188 943 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 OR6B2Q6IFH4 312 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 HFE2Q6ZVN8 426 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 BHLHA9Q7RTU4 235 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 SCD5Q86SK9 330 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 VPS36Q86VN1 386 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 ATXN2LQ8WWM7 1075 aaKnown RBP18.73■□□□□ 0.59
CPNE1-224ENST00000483359 FAM149B1Q96BN6 582 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 SMG9Q9H0W8 520 aaKnown RBP18.73■□□□□ 0.59
CPNE1-224ENST00000483359 DEF6Q9H4E7 631 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 CCSER2Q9H7U1 834 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 CDH7Q9ULB5 785 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 C2CD4DB7Z1M9 353 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 YWHAGP61981 247 aaKnown RBP eCLIP18.72■□□□□ 0.59
CPNE1-224ENST00000483359 PM20D1Q6GTS8 502 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 TDRD5Q8NAT2 981 aaKnown RBP18.72■□□□□ 0.59
CPNE1-224ENST00000483359 TTC16Q8NEE8 873 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 OVCA2Q8WZ82 227 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 ASB2Q96Q27 587 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 SLC22A12Q96S37 553 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 CYP2S1Q96SQ9 504 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.72■□□□□ 0.59
CPNE1-224ENST00000483359 IMPACTQ9P2X3 320 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 DOCK8Q8NF50 2099 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 GOLGA6L6A8MZA4 724 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 GRAP2O75791 330 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 FBXO21O94952 628 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 GFPT1Q06210 699 aaPredicted RBP18.72■□□□□ 0.59
CPNE1-224ENST00000483359 TAF5Q15542 800 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 OTOP3Q7RTS5 596 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 MON1AQ86VX9 555 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 MSANTD4Q8NCY6 345 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 EDEM1Q92611 657 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 C18orf8Q96DM3 657 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 SLC46A2Q9BY10 475 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 CYLDQ9NQC7 956 aa18.72■□□□□ 0.59
CPNE1-224ENST00000483359 A0A087X0T9 212 aa18.71■□□□□ 0.59
CPNE1-224ENST00000483359 GOLGA8SH3BPF8 625 aa18.71■□□□□ 0.59
CPNE1-224ENST00000483359 CKMP06732 381 aa18.71■□□□□ 0.59
CPNE1-224ENST00000483359 ZDHHC11BP0C7U3 371 aa18.71■□□□□ 0.59
CPNE1-224ENST00000483359 FAM228BP0C875 321 aa18.71■□□□□ 0.59
CPNE1-224ENST00000483359 MMP8P22894 467 aa18.71■□□□□ 0.59
CPNE1-224ENST00000483359 PPP3CCP48454 512 aa18.71■□□□□ 0.59
CPNE1-224ENST00000483359 ARL14EPQ8N8R7 260 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-224ENST00000483359 ZSCAN18Q8TBC5 510 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-224ENST00000483359 ACSF2Q96CM8 615 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-224ENST00000483359 NACA2Q9H009 215 aa18.71■□□□□ 0.59
CPNE1-224ENST00000483359 TASP1Q9H6P5 420 aa18.71■□□□□ 0.59
CPNE1-224ENST00000483359 NHEJ1Q9H9Q4 299 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-224ENST00000483359 ADAM22Q9P0K1 906 aa18.71■□□□□ 0.59
CPNE1-224ENST00000483359 NCANO14594 1321 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 TCF20Q9UGU0 1960 aaKnown RBP18.7■□□□□ 0.58
CPNE1-224ENST00000483359 TLR5O60602 858 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 TBX18O95935 607 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 RARGP13631 454 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 HECTD3Q5T447 861 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 BSPRYQ5W0U4 402 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 BTBD8Q5XKL5 378 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 ACAD10Q6JQN1 1059 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 OLFML1Q6UWY5 402 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 XYLT1Q86Y38 959 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.7■□□□□ 0.58
CPNE1-224ENST00000483359 MDM4O15151 490 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 COCHO43405 550 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 AKR1B10O60218 316 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 LTFP02788 710 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 LAMP2P13473 410 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 AVPR1AP37288 418 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 SNX16P57768 344 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 FAM102AQ5T9C2 384 aaPredicted RBP18.7■□□□□ 0.58
CPNE1-224ENST00000483359 MON1BQ7L1V2 547 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 RSRC2Q7L4I2 434 aaKnown RBP18.7■□□□□ 0.58
CPNE1-224ENST00000483359 ANP32BQ92688 251 aaKnown RBP18.7■□□□□ 0.58
CPNE1-224ENST00000483359 GOLGA1Q92805 767 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 CCDC42Q96M95 316 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 PANX2Q96RD6 677 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 RNF38Q9H0F5 515 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 SPTLC3Q9NUV7 552 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.7■□□□□ 0.58
CPNE1-224ENST00000483359 GDE1Q9NZC3 331 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 NR2E1Q9Y466 385 aa18.7■□□□□ 0.58
CPNE1-224ENST00000483359 ATMINO43313 823 aaPredicted RBP18.69■□□□□ 0.58
CPNE1-224ENST00000483359 PRAMEF12O95522 483 aa18.69■□□□□ 0.58
CPNE1-224ENST00000483359 OAS1P00973 400 aaKnown RBP18.69■□□□□ 0.58
CPNE1-224ENST00000483359 HDCP19113 662 aa18.69■□□□□ 0.58
CPNE1-224ENST00000483359 GABRB2P47870 512 aa18.69■□□□□ 0.58
CPNE1-224ENST00000483359 FAM78AQ5JUQ0 283 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms