RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 BBS7Q8IWZ6 715 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 ETFBKMTQ8IXQ9 262 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 SCAMP5Q8TAC9 235 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 FBXO32Q969P5 355 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 OTUB2Q96DC9 234 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 ZFRQ96KR1 1074 aaKnown RBP13.62□□□□□ -0.23
TMEM54-206ENST00000482771 CAMK1GQ96NX5 476 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 KCNK16Q96T55 309 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 DPEP3Q9H4B8 488 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 SPHK2Q9NRA0 654 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 HSPBP1Q9NZL4 362 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 CALCOCO1Q9P1Z2 691 aa13.62□□□□□ -0.23
TMEM54-206ENST00000482771 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.62□□□□□ -0.23
TMEM54-206ENST00000482771 ACACAQ13085 2346 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 A0A1W2PQF6 199 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 A8MXQ7 604 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 SH3BP5O60239 455 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 RTN3O95197 1032 aaPredicted RBP13.61□□□□□ -0.23
TMEM54-206ENST00000482771 SYPP08247 313 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 HOXB2P14652 356 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 NTSR1P30989 418 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 STAT6P42226 847 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 CEBPZQ03701 1054 aaKnown RBP13.61□□□□□ -0.23
TMEM54-206ENST00000482771 HNRNPDQ14103 355 aaKnown RBP13.61□□□□□ -0.23
TMEM54-206ENST00000482771 TRIP6Q15654 476 aaKnown RBP13.61□□□□□ -0.23
TMEM54-206ENST00000482771 ZNF423Q2M1K9 1284 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 SDE2Q6IQ49 451 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 C19orf48Q6RUI8 117 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 RABEPKQ7Z6M1 372 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 RAB44Q7Z6P3 723 aaPredicted RBP13.61□□□□□ -0.23
TMEM54-206ENST00000482771 WDR49Q8IV35 697 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 SLC41A1Q8IVJ1 513 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 CCDC65Q8IXS2 484 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 TRIML1Q8N9V2 468 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 GLIS3Q8NEA6 775 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 PDZD8Q8NEN9 1154 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 HPS3Q969F9 1004 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 WBP2Q969T9 261 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 CCDC127Q96BQ5 260 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 ACOX2Q99424 681 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 ELOVL4Q9GZR5 314 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 CCSER2Q9H7U1 834 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 CYP8B1Q9UNU6 501 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 STARD13Q9Y3M8 1113 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 PCDHB9Q9Y5E1 797 aa13.61□□□□□ -0.23
TMEM54-206ENST00000482771 WDFY3Q8IZQ1 3526 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 IGHV1OR15-9A0A0B4J2B8 117 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
TMEM54-206ENST00000482771 HOXC11O43248 304 aaPredicted RBP13.6□□□□□ -0.23
TMEM54-206ENST00000482771 ZNF217O75362 1048 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 CAPNS1P04632 268 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 IRF1P10914 325 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 HOXD13P35453 343 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 TNNC1P63316 161 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 SCAPQ12770 1279 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 C8orf34Q49A92 452 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 EGFLAMQ63HQ2 1017 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 STXBP4Q6ZWJ1 553 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 CHPFQ8IZ52 775 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 RGL4Q8IZJ4 473 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 PNPLA1Q8N8W4 532 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 TERB1Q8NA31 727 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 B3GALNT2Q8NCR0 500 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 IPO4Q8TEX9 1081 aaKnown RBP13.6□□□□□ -0.23
TMEM54-206ENST00000482771 OVCA2Q8WZ82 227 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 ZNF419Q96HQ0 510 aaPredicted RBP13.6□□□□□ -0.23
TMEM54-206ENST00000482771 DNAAF2Q9NVR5 837 aaKnown RBP13.6□□□□□ -0.23
TMEM54-206ENST00000482771 NXF1Q9UBU9 619 aaKnown RBP13.6□□□□□ -0.23
TMEM54-206ENST00000482771 ADAMTS9Q9P2N4 1935 aa13.6□□□□□ -0.23
TMEM54-206ENST00000482771 LAMA5O15230 3695 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 A0A087X0B3 334 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 A0A1W2PQD8 194 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 NDUFS2O75306 463 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 MAOBP27338 520 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 CDH8P55286 799 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 MYL6P60660 151 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 SLC14A1Q13336 389 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 TRPC3Q13507 836 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 SNRNP35Q16560 246 aaKnown RBP13.59□□□□□ -0.23
TMEM54-206ENST00000482771 PLEKHG6Q3KR16 790 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 SNX30Q5VWJ9 437 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 GRAMD4Q6IC98 578 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 FAM173BQ6P4H8 233 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 PROSER1Q86XN7 944 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 PDILTQ8N807 584 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 ZNF516Q92618 1163 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 HSPA12BQ96MM6 686 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 MED10Q9BTT4 135 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 NACA2Q9H009 215 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 DNAJC17Q9NVM6 304 aaKnown RBP13.59□□□□□ -0.23
TMEM54-206ENST00000482771 IL37Q9NZH6 218 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 GMIPQ9P107 970 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 APC2O95996 2303 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 NBEAQ8NFP9 2946 aa13.59□□□□□ -0.23
TMEM54-206ENST00000482771 URB1O60287 2271 aaKnown RBP13.59□□□□□ -0.23
TMEM54-206ENST00000482771 CLIC2O15247 247 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 NDUFV2P19404 249 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 PGFP49763 221 aa13.58□□□□□ -0.24
TMEM54-206ENST00000482771 PSMD6Q15008 389 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms