RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 CAMK1Q14012 370 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 RPS6KA1Q15418 735 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 CCDC149Q6ZUS6 474 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 BHLHA9Q7RTU4 235 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 MON1AQ86VX9 555 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 EMC1Q8N766 993 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 SCAMP5Q8TAC9 235 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 RXFP2Q8WXD0 754 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 ZNF592Q92610 1267 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 GOLGA1Q92805 767 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 CD101Q93033 1021 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 TTLL2Q9BWV7 592 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 TLR10Q9BXR5 811 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 NKX2-4Q9H2Z4 354 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 SLC28A3Q9HAS3 691 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 CYP4F11Q9HBI6 524 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 POPDC2Q9HBU9 364 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 TMEM51Q9NW97 253 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 RRN3Q9NYV6 651 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.1□□□□□ -0.31
IFT88-206ENST00000482172 MTUS1Q9ULD2 1270 aa13.1□□□□□ -0.31
IFT88-206ENST00000482172 COL4A4P53420 1690 aaPredicted RBP13.09□□□□□ -0.31
IFT88-206ENST00000482172 CCDC66A2RUB6 948 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 SLC38A8A6NNN8 435 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 YJEFN3A6XGL0 299 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 TMEM110-MUSTN1A8MSY1 372 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 E7ENQ6 273 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 CES2O00748 559 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 ENC1O14682 589 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 TGM5O43548 720 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 SPOPO43791 374 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 GRAP2O75791 330 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 RNF8O76064 485 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 LTFP02788 710 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 CSH1P0DML2 217 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 CSH2P0DML3 217 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 TCP1P17987 556 aaKnown RBP13.09□□□□□ -0.31
IFT88-206ENST00000482172 KLRC2P26717 231 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 YWHAQP27348 245 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 CTNNA1P35221 906 aaKnown RBP13.09□□□□□ -0.31
IFT88-206ENST00000482172 PCK1P35558 622 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 PSEN1P49768 467 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 RNASE9P60153 205 aaKnown RBP13.09□□□□□ -0.31
IFT88-206ENST00000482172 AMPD2Q01433 879 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 TAF5Q15542 800 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 CCDC14Q49A88 953 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 LRRC38Q5VT99 294 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 PLPP4Q5VZY2 271 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 TRNP1Q6NT89 227 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 SPRED2Q7Z698 418 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 UBL4BQ8N7F7 174 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 MICAL1Q8TDZ2 1067 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 HDAC7Q8WUI4 952 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 OVCA2Q8WZ82 227 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 CENPIQ92674 756 aaPredicted RBP13.09□□□□□ -0.31
IFT88-206ENST00000482172 NT5C3BQ969T7 300 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 FAM149B1Q96BN6 582 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 MYRFLQ96LU7 910 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 GOLPH3Q9H4A6 298 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 ABCC13Q9NSE7 274 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 FBXW11Q9UKB1 542 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 STAP1Q9ULZ2 295 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 SNX12Q9UMY4 172 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
IFT88-206ENST00000482172 HYOU1Q9Y4L1 999 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 YIPF1Q9Y548 306 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 ASB3Q9Y575 518 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
IFT88-206ENST00000482172 HIDE1A8MVS5 230 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 PRRG1O14668 218 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 PSTPIP1O43586 416 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 SOAT2O75908 522 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 ENDOD1O94919 500 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 GLUD1P00367 558 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 CA8P35219 290 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 YWHAGP61981 247 aaKnown RBP eCLIP13.08□□□□□ -0.32
IFT88-206ENST00000482172 VEPH1Q14D04 833 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 SLC25A52Q3SY17 297 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 SDHAF4Q5VUM1 108 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 BSPRYQ5W0U4 402 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 CC2D1AQ6P1N0 951 aaPredicted RBP13.08□□□□□ -0.32
IFT88-206ENST00000482172 STRADAQ7RTN6 431 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 BNIPLQ7Z465 357 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 RHOT1Q8IXI2 618 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 DEFB106AQ8N104 65 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 ZNF276Q8N554 614 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.32
IFT88-206ENST00000482172 PGAP3Q96FM1 320 aaPredicted RBP13.08□□□□□ -0.32
IFT88-206ENST00000482172 TRMT2BQ96GJ1 504 aaKnown RBP13.08□□□□□ -0.32
IFT88-206ENST00000482172 NPY6RQ99463 290 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 CLIC5Q9NZA1 410 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.08□□□□□ -0.32
IFT88-206ENST00000482172 INSL5Q9Y5Q6 135 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 SAR1BQ9Y6B6 198 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 PLXNA3P51805 1871 aa13.08□□□□□ -0.32
IFT88-206ENST00000482172 A0A1W2PPC1 479 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 CAPN9O14815 690 aa13.07□□□□□ -0.32
IFT88-206ENST00000482172 DDX3YO15523 660 aaKnown RBP13.07□□□□□ -0.32
IFT88-206ENST00000482172 NCK2O43639 380 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms