RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ITIH4Q14624 930 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 LRRC38Q5VT99 294 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 NETO2Q8NC67 525 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 FNIP1Q8TF40 1166 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 FAM172AQ8WUF8 416 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 TRAIPQ9BWF2 469 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 NSRP1Q9H0G5 558 aaKnown RBP15.1■□□□□ 0.01
CHD3-211ENST00000481999 TRPV6Q9H1D0 765 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 TMPRSS4Q9NRS4 437 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 WDR35Q9P2L0 1181 aa15.1■□□□□ 0.01
CHD3-211ENST00000481999 DNM1LO00429 736 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 RNF8O76064 485 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 KLRC2P26717 231 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 CACNA2D1P54289 1103 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 PAQR9Q6ZVX9 377 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 ZNF365Q70YC5 407 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 PIGWQ7Z7B1 504 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 FUKQ8N0W3 1084 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 B3GALNT2Q8NCR0 500 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 KLHDC9Q8NEP7 349 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 ZNF560Q96MR9 790 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 PRMT1Q99873 361 aaKnown RBP15.09■□□□□ 0.01
CHD3-211ENST00000481999 SLC4A5Q9BY07 1137 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 GDAP2Q9NXN4 497 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 SAMD15Q9P1V8 674 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 SYNJ2BP-COX16A0A087WUM0 186 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 BANF1O75531 89 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 RASSF9O75901 435 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 TTC4O95801 387 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 ITGB1P05556 798 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 CDH6P55285 790 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 GSCP56915 257 aaPredicted RBP15.09■□□□□ 0.01
CHD3-211ENST00000481999 ITGA7Q13683 1181 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 LPIN1Q14693 890 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 TMEM110Q86TL2 294 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 EXOC3L1Q86VI1 746 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 LRRC34Q8IZ02 419 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 BBOF1Q8ND07 529 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 COX16Q9P0S2 106 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 ANAPC5Q9UJX4 755 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 NOD1Q9Y239 953 aa15.09■□□□□ 0.01
CHD3-211ENST00000481999 GOLGA8MH3BSY2 632 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 SGK1O00141 431 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 SCTRP47872 440 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 ARSEP51690 589 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 GTF2A1P52655 376 aaPredicted RBP15.08■□□□□ 0.01
CHD3-211ENST00000481999 HDAC4P56524 1084 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 SLC6A3Q01959 620 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 OASLQ15646 514 aaKnown RBP15.08■□□□□ 0.01
CHD3-211ENST00000481999 LONRF1Q17RB8 773 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 MDH1BQ5I0G3 518 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 IZUMO3Q5VZ72 239 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 PIGZQ86VD9 579 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 ZC3H18Q86VM9 953 aaKnown RBP15.08■□□□□ 0.01
CHD3-211ENST00000481999 RFX6Q8HWS3 928 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 ARHGEF2Q92974 986 aaKnown RBP15.08■□□□□ 0.01
CHD3-211ENST00000481999 SENP8Q96LD8 212 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 KCNK16Q96T55 309 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 ADAM2Q99965 735 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 SLC40A1Q9NP59 571 aa15.08■□□□□ 0.01
CHD3-211ENST00000481999 CCT8L1PA6NM43 557 aa15.08■□□□□ 0
CHD3-211ENST00000481999 THP07101 528 aa15.08■□□□□ 0
CHD3-211ENST00000481999 BRCC3P46736 316 aa15.08■□□□□ 0
CHD3-211ENST00000481999 MNAT1P51948 309 aa15.08■□□□□ 0
CHD3-211ENST00000481999 ADIGQ0VDE8 80 aa15.08■□□□□ 0
CHD3-211ENST00000481999 FASTKD3Q14CZ7 662 aaKnown RBP15.08■□□□□ 0
CHD3-211ENST00000481999 KYNUQ16719 465 aa15.08■□□□□ 0
CHD3-211ENST00000481999 HADHQ16836 314 aaKnown RBP15.08■□□□□ 0
CHD3-211ENST00000481999 SV2CQ496J9 727 aa15.08■□□□□ 0
CHD3-211ENST00000481999 PPP6R3Q5H9R7 873 aaPredicted RBP15.08■□□□□ 0
CHD3-211ENST00000481999 SWT1Q5T5J6 900 aaKnown RBP15.08■□□□□ 0
CHD3-211ENST00000481999 POLNQ7Z5Q5 900 aa15.08■□□□□ 0
CHD3-211ENST00000481999 RSPH3Q86UC2 560 aa15.08■□□□□ 0
CHD3-211ENST00000481999 UNC93AQ86WB7 457 aa15.08■□□□□ 0
CHD3-211ENST00000481999 CCDC89Q8N998 374 aa15.08■□□□□ 0
CHD3-211ENST00000481999 ANKRD52Q8NB46 1076 aa15.08■□□□□ 0
CHD3-211ENST00000481999 C9orf72Q96LT7 481 aa15.08■□□□□ 0
CHD3-211ENST00000481999 CNPY3Q9BT09 278 aa15.08■□□□□ 0
CHD3-211ENST00000481999 CRTAC1Q9NQ79 661 aa15.08■□□□□ 0
CHD3-211ENST00000481999 KLC4Q9NSK0 619 aa15.08■□□□□ 0
CHD3-211ENST00000481999 WBP1LQ9NX94 342 aa15.08■□□□□ 0
CHD3-211ENST00000481999 DDX43Q9NXZ2 648 aaKnown RBP15.08■□□□□ 0
CHD3-211ENST00000481999 KIAA1257Q9ULG3 409 aa15.08■□□□□ 0
CHD3-211ENST00000481999 NR2E3Q9Y5X4 410 aa15.08■□□□□ 0
CHD3-211ENST00000481999 TTC3P53804 2025 aa15.07■□□□□ 0
CHD3-211ENST00000481999 MYBPHLA2RUH7 354 aa15.07■□□□□ 0
CHD3-211ENST00000481999 B4GALT3O60512 393 aa15.07■□□□□ 0
CHD3-211ENST00000481999 TCEA3O75764 348 aa15.07■□□□□ 0
CHD3-211ENST00000481999 PIAS1O75925 651 aa15.07■□□□□ 0
CHD3-211ENST00000481999 ALDH1A1P00352 501 aa15.07■□□□□ 0
CHD3-211ENST00000481999 VIMP08670 466 aaKnown RBP15.07■□□□□ 0
CHD3-211ENST00000481999 KRT7P08729 469 aa15.07■□□□□ 0
CHD3-211ENST00000481999 BST2Q10589 180 aaKnown RBP15.07■□□□□ 0
CHD3-211ENST00000481999 GPS1Q13098 491 aa15.07■□□□□ 0
CHD3-211ENST00000481999 SPRED3Q2MJR0 410 aa15.07■□□□□ 0
CHD3-211ENST00000481999 CCDC38Q502W7 563 aa15.07■□□□□ 0
CHD3-211ENST00000481999 CAPN12Q6ZSI9 719 aa15.07■□□□□ 0
CHD3-211ENST00000481999 CRYBG2Q8N1P7 616 aa15.07■□□□□ 0
CHD3-211ENST00000481999 ASNSD1Q9NWL6 643 aa15.07■□□□□ 0
CHD3-211ENST00000481999 DDX56Q9NY93 547 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms