RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 ICE2Q659A1 982 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 SFRP4Q6FHJ7 346 aaPredicted RBP7.41□□□□□ -1.22
SEC22A-207ENST00000481965 FOXR2Q6PJQ5 311 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 CLEC9AQ6UXN8 241 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 LIMS2Q7Z4I7 341 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 GDF7Q7Z4P5 450 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 TMEM57Q8N5G2 664 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 ATG4AQ8WYN0 398 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 SNX19Q92543 992 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 GOLGA1Q92805 767 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 HVCN1Q96D96 273 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 NEUROD6Q96NK8 337 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 DCLRE1CQ96SD1 692 aaKnown RBP7.41□□□□□ -1.22
SEC22A-207ENST00000481965 C17orf80Q9BSJ5 609 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 INO80BQ9C086 356 aaPredicted RBP7.41□□□□□ -1.22
SEC22A-207ENST00000481965 AMBRA1Q9C0C7 1298 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 BRD8Q9H0E9 1235 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 NRBP1Q9UHY1 535 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 USP22Q9UPT9 525 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 DNAJC16Q9Y2G8 782 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.41□□□□□ -1.22
SEC22A-207ENST00000481965 ITIH6Q6UXX5 1313 aa7.41□□□□□ -1.22
SEC22A-207ENST00000481965 BAIAP3O94812 1187 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 HLA-DOAP06340 250 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 PDHA1P08559 390 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 YY1P25490 414 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 SERPINA4P29622 427 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 PRKAR1BP31321 381 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 KRT9P35527 623 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 CDK7P50613 346 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 FPGSQ05932 587 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 SLC9C2Q5TAH2 1124 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 SLC9A4Q6AI14 798 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 MZT2BQ6NZ67 158 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 TRABD2AQ86V40 505 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 C11orf44Q8N8P7 122 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 FEZF2Q8TBJ5 459 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 WDR60Q8WVS4 1066 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 HDAC2Q92769 488 aaKnown RBP7.4□□□□□ -1.22
SEC22A-207ENST00000481965 REEP2Q9BRK0 252 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 TTPALQ9BTX7 342 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 VN1R3Q9BXE9 311 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 ZNF768Q9H5H4 540 aaKnown RBP7.4□□□□□ -1.22
SEC22A-207ENST00000481965 UNKLQ9H9P5 680 aaKnown RBP7.4□□□□□ -1.22
SEC22A-207ENST00000481965 TRPM5Q9NZQ8 1165 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 RNF181Q9P0P0 153 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 EIF2B4Q9UI10 523 aaKnown RBP7.4□□□□□ -1.22
SEC22A-207ENST00000481965 MAP3K2Q9Y2U5 619 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 DERAQ9Y315 318 aa7.4□□□□□ -1.22
SEC22A-207ENST00000481965 ZNF536O15090 1300 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 GXYLT2A0PJZ3 443 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 MYADML2A6NDP7 307 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 PPM1DO15297 605 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 PLATP00750 562 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 EPHA3P29320 983 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 PBX1P40424 430 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 HNRNPMP52272 730 aaKnown RBP eCLIP7.39□□□□□ -1.231e-9■■■■■ 33.1
SEC22A-207ENST00000481965 TIRAPP58753 221 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 CSHL1Q14406 222 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 RPS6KA2Q15349 733 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 ZNF124Q15973 351 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 PREPLQ4J6C6 727 aaPredicted RBP7.39□□□□□ -1.23
SEC22A-207ENST00000481965 TMEM196Q5HYL7 178 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 CFAP161Q6P656 301 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 OSCP1Q8WVF1 389 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 FAM136AQ96C01 138 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 PAAF1Q9BRP4 392 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 GPR63Q9BZJ6 419 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 JMJD4Q9H9V9 463 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 NDUFAF4Q9P032 175 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 PI4KBQ9UBF8 816 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 FPGT-TNNI3KV9GXZ4 949 aa7.39□□□□□ -1.23
SEC22A-207ENST00000481965 LOC105369274A0A096LPK9 316 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 LOC102723532A0A0G2JNH3 316 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 LOC100996750A0A140TA64 210 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 PATE3B3GLJ2 98 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 STX16-NPEPL1H3BU86 382 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 STX16O14662 325 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 TRIM24O15164 1050 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 TRIAP1O43715 76 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 RECQL4O94761 1208 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 TFRCP02786 760 aaKnown RBP7.38□□□□□ -1.23
SEC22A-207ENST00000481965 HNRNPA1P09651 372 aaKnown RBP eCLIP7.38□□□□□ -1.23
SEC22A-207ENST00000481965 COMTP21964 271 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 HHEXQ03014 270 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 SF3A3Q12874 501 aaKnown RBP eCLIP7.38□□□□□ -1.23
SEC22A-207ENST00000481965 CLCA4Q14CN2 919 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 C1QL4Q86Z23 238 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 IZUMO1Q8IYV9 350 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 OR4N4Q8N0Y3 316 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 FSTL5Q8N475 847 aaPredicted RBP7.38□□□□□ -1.23
SEC22A-207ENST00000481965 Q8TCH9 128 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 SLC22A17Q8WUG5 538 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 HMGB4Q8WW32 186 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 ATRIPQ8WXE1 791 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 CPT1BQ92523 772 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 KRTAP4-6Q9BYQ5 205 aa7.38□□□□□ -1.23
SEC22A-207ENST00000481965 FBXO2Q9UK22 296 aaPredicted RBP7.38□□□□□ -1.23
SEC22A-207ENST00000481965 LMTK3Q96Q04 1460 aa7.37□□□□□ -1.23
SEC22A-207ENST00000481965 DYTNA2CJ06 578 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms