RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CCDC85BQ15834 202 aaPredicted RBP12.17□□□□□ -0.46
HPS4-212ENST00000481910 PTPN20Q4JDL3 420 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 C2CD6Q53TS8 623 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 RAB41Q5JT25 222 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 PPP1R2P3Q6NXS1 205 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 RAD9BQ6WBX8 426 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 DNAJB7Q7Z6W7 309 aaPredicted RBP12.17□□□□□ -0.46
HPS4-212ENST00000481910 TMEM110Q86TL2 294 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 ITIH5Q86UX2 942 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 DNAAF5Q86Y56 855 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 SCUBE3Q8IX30 993 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 SIX6OS1Q8N1H7 587 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 MSANTD4Q8NCY6 345 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 PSMG2Q969U7 264 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 IRF2BPLQ9H1B7 796 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 ZDHHC7Q9NXF8 308 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 CLDND1Q9NY35 253 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 ASB3Q9Y575 518 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 GREB1Q4ZG55 1949 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 E5RJQ4 531 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 XYLBO75191 536 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 RTN3O95197 1032 aaPredicted RBP12.17□□□□□ -0.46
HPS4-212ENST00000481910 NDUFA10O95299 355 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 MMP8P22894 467 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 YWHAQP27348 245 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 HOXA9P31269 272 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 RPL34P49207 117 aaKnown RBP12.17□□□□□ -0.46
HPS4-212ENST00000481910 SPA17Q15506 151 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 MMS22LQ6ZRQ5 1243 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 PHF13Q86YI8 300 aaPredicted RBP12.17□□□□□ -0.46
HPS4-212ENST00000481910 C12orf76Q8N812 135 aaPredicted RBP12.17□□□□□ -0.46
HPS4-212ENST00000481910 C18orf8Q96DM3 657 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 C11orf70Q9BRQ4 267 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 PRKD2Q9BZL6 878 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 MIS12Q9H081 205 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 ISCUQ9H1K1 167 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 FBXO44Q9H4M3 255 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 SFXN1Q9H9B4 322 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 CYLDQ9NQC7 956 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 DZANK1Q9NVP4 752 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 UTP6Q9NYH9 597 aaKnown RBP12.17□□□□□ -0.46
HPS4-212ENST00000481910 EHD2Q9NZN4 543 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 ADAM22Q9P0K1 906 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 TJP2Q9UDY2 1190 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 ARHGAP6O43182 974 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 ZBED1O96006 694 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 ERBB2P04626 1255 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 USP17L7P0C7H9 530 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 NAT1P18440 290 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 GABRB2P47870 512 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 USP46P62068 366 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 CCZ1BP86790 482 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 CCZ1P86791 482 aaPredicted RBP12.16□□□□□ -0.46
HPS4-212ENST00000481910 ZNF638Q14966 1978 aaKnown RBP12.16□□□□□ -0.46
HPS4-212ENST00000481910 ZFYVE27Q5T4F4 411 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 CYP4A22Q5TCH4 519 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 ANKRD54Q6NXT1 300 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 TMC5Q6UXY8 1006 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 MAMSTRQ6ZN01 415 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 MCOLN2Q8IZK6 566 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 PATJQ8NI35 1801 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 PPM1EQ8WY54 764 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 ULBP1Q9BZM6 244 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 PIDD1Q9HB75 910 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
HPS4-212ENST00000481910 EIF3CLB5ME19 914 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 ZNF263O14978 683 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 LCA5LO95447 670 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 CALB1P05937 261 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 HMGA1P17096 107 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 HOXB8P17481 243 aaPredicted RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 PTPN2P17706 415 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 ABCB4P21439 1286 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 CTC1Q2NKJ3 1217 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 RARS2Q5T160 578 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 OR6B2Q6IFH4 312 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 MON1BQ7L1V2 547 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 PHLDB2Q86SQ0 1253 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 PABPC5Q96DU9 382 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 VCPIP1Q96JH7 1222 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 MYRFLQ96LU7 910 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 EIF3CQ99613 913 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 CORO1BQ9BR76 489 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 APOL5Q9BWW9 433 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 IQCGQ9H095 443 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 CNGB3Q9NQW8 809 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 COMMD8Q9NX08 183 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 IL37Q9NZH6 218 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 CHORDC1Q9UHD1 332 aaPredicted RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 STRIP2Q9ULQ0 834 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 DOCK6Q96HP0 2047 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 PAPSS1O43252 624 aaPredicted RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 FBXO21O94952 628 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 MRPS5P82675 430 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 DLX2Q07687 328 aaPredicted RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 TAF10Q12962 218 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 PDCD2Q16342 344 aaPredicted RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 C10orf76Q5T2E6 689 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 PM20D1Q6GTS8 502 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms