RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 ZNF396Q96N95 335 aaPredicted RBP9.62□□□□□ -0.87
HLA-B-253ENST00000481849 FAM83CQ9BQN1 747 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 SYT15Q9BQS2 421 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 TNMDQ9H2S6 317 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 FBRSL1Q9HCM7 1045 aaKnown RBP9.62□□□□□ -0.87
HLA-B-253ENST00000481849 INTS13Q9NVM9 706 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 GDAP2Q9NXN4 497 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 HSPBP1Q9NZL4 362 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 WNT6Q9Y6F9 365 aa9.62□□□□□ -0.87
HLA-B-253ENST00000481849 CITO14578 2027 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 TRAV19A0A0A6YYK7 116 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.61□□□□□ -0.87
HLA-B-253ENST00000481849 C2orf78A6NCI8 922 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 PRR5-ARHGAP8B1AHC4 643 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 GABRDO14764 452 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 NOL4O94818 638 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 CLSTN1O94985 981 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 STAU1O95793 577 aaKnown RBP9.61□□□□□ -0.87
HLA-B-253ENST00000481849 RETP07949 1114 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 THBS1P07996 1170 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 USP17L7P0C7H9 530 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 TNNI1P19237 187 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 SDHBP21912 280 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 BDNFP23560 247 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 PCSK1P29120 753 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 GRIK1P39086 918 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 IFNAR2P48551 515 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 GALK1P51570 392 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 ARHGAP8P85298 464 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 PSMD2Q13200 908 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 MTF1Q14872 753 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 TLR1Q15399 786 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 CCDC6Q16204 474 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 DUOXA2Q1HG44 320 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 PLA2G4EQ3MJ16 856 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 TMEM196Q5HYL7 178 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 PHTF2Q8N3S3 785 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 KBTBD7Q8WVZ9 684 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 MRPL45Q9BRJ2 306 aaKnown RBP9.61□□□□□ -0.87
HLA-B-253ENST00000481849 TRIM9Q9C026 710 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 LRRC27Q9C0I9 530 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 BLZF1Q9H2G9 400 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 KIF9Q9HAQ2 790 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 ETNK1Q9HBU6 452 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 ABCB6Q9NP58 842 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 CRTAC1Q9NQ79 661 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 SEMA4GQ9NTN9 838 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 DUS2Q9NX74 493 aaKnown RBP9.61□□□□□ -0.87
HLA-B-253ENST00000481849 MAGEC2Q9UBF1 373 aaPredicted RBP9.61□□□□□ -0.87
HLA-B-253ENST00000481849 UXTQ9UBK9 157 aaPredicted RBP9.61□□□□□ -0.87
HLA-B-253ENST00000481849 ZMYM5Q9UJ78 669 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 GDF2Q9UK05 429 aaPredicted RBP9.61□□□□□ -0.87
HLA-B-253ENST00000481849 SLC8A2Q9UPR5 921 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 PDCD11Q14690 1871 aaKnown RBP9.61□□□□□ -0.87
HLA-B-253ENST00000481849 TSC2P49815 1807 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 PATJQ8NI35 1801 aa9.61□□□□□ -0.87
HLA-B-253ENST00000481849 MIA3Q5JRA6 1907 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 TICRRQ7Z2Z1 1910 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 SCAMP3O14828 347 aaKnown RBP9.6□□□□□ -0.87
HLA-B-253ENST00000481849 KIAA0391O15091 583 aaKnown RBP9.6□□□□□ -0.87
HLA-B-253ENST00000481849 TGFB1I1O43294 461 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 CUTAO60888 179 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 PAPSS2O95340 614 aaPredicted RBP9.6□□□□□ -0.87
HLA-B-253ENST00000481849 ABL1P00519 1130 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 GJA4P35212 333 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 AFMP43652 599 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 AMPD3Q01432 767 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 FAM160A1Q05DH4 1040 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 IFRD2Q12894 506 aaPredicted RBP9.6□□□□□ -0.87
HLA-B-253ENST00000481849 KCNB1Q14721 858 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 PDGFRLQ15198 375 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 SURF1Q15526 300 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 SNRNP35Q16560 246 aaKnown RBP9.6□□□□□ -0.87
HLA-B-253ENST00000481849 CFAP221Q4G0U5 840 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 MDH1BQ5I0G3 518 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 FAM26FQ5R3K3 315 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 FAM171BQ6P995 826 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 SHC4Q6S5L8 630 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 C4orf50Q6ZRC1 276 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 HS2ST1Q7LGA3 356 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 TRAPPC11Q7Z392 1133 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 WDR5BQ86VZ2 330 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 WDR49Q8IV35 697 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 SYNPOQ8N3V7 929 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 CPA6Q8N4T0 437 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 IQUBQ8NA54 791 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 OR6B3Q8NGW1 331 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 SH3RF2Q8TEC5 729 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 TRMT2BQ96GJ1 504 aaKnown RBP9.6□□□□□ -0.87
HLA-B-253ENST00000481849 MYRFLQ96LU7 910 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 HHIPQ96QV1 700 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 FNBP1Q96RU3 617 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 P2RY13Q9BPV8 354 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 BACH2Q9BYV9 841 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 LINC00597Q9H2U6 94 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 SNX25Q9H3E2 840 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 ECT2Q9H8V3 914 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 SLC39A2Q9NP94 309 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 AGPAT3Q9NRZ7 376 aa9.6□□□□□ -0.87
HLA-B-253ENST00000481849 KBTBD4Q9NVX7 518 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms