RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 NOD2Q9HC29 1040 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 TLR8Q9NR97 1041 aaKnown RBP3.63□□□□□ -1.83
SMC6-208ENST00000481708 PCDHB16Q9NRJ7 776 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 TBC1D23Q9NUY8 699 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 CEP83Q9Y592 693 aa3.63□□□□□ -1.83
SMC6-208ENST00000481708 MYH1P12882 1939 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 VWA3AA6NCI4 1184 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 URADA6NGE7 173 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 SH2B2O14492 632 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 SLC27A2O14975 620 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 GSTA4O15217 222 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 IPO8O15397 1037 aaKnown RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 ADCY6O43306 1168 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 GSTM1P09488 218 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 LAMP2P13473 410 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 FPR1P21462 350 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 EPHA8P29322 1005 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 PRDX5P30044 214 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 LAPTM5Q13571 262 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 FHL3Q13643 280 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 KCNB1Q14721 858 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 PARP10Q53GL7 1025 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 CCDC158Q5M9N0 1113 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 KCTD1Q719H9 257 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ANKS1BQ7Z6G8 1248 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 MSANTD4Q8NCY6 345 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ZNF540Q8NDQ6 660 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMC6-208ENST00000481708 HDAC10Q969S8 669 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 SENP6Q9GZR1 1112 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 SLC25A18Q9H1K4 315 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 DUSP15Q9H1R2 295 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 INCENPQ9NQS7 918 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 SNX15Q9NRS6 342 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 PNPOQ9NVS9 261 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 DSEQ9UL01 958 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 UTYO14607 1347 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 NPIPB15A6NHN6 443 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 BTN3A1O00481 513 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 HNRNPRO43390 633 aaKnown RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 KCNQ3O43525 872 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 CBX7O95931 251 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ZNF853P0CG23 659 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 DPEP1P16444 411 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 EGR1P18146 543 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 FNTBP49356 437 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ATP8B2P98198 1209 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ADAM15Q13444 863 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 TTC22Q5TAA0 569 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ZCCHC12Q6PEW1 402 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ZDHHC24Q6UX98 284 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ABHD15Q6UXT9 468 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 LILRA3Q8N6C8 439 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 MCRS1Q96EZ8 462 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 CLPTM1LQ96KA5 538 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 NACC1Q96RE7 527 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 LIN28AQ9H9Z2 209 aaKnown RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 SAYSD1Q9NPB0 183 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 CCNL1Q9UK58 526 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 WASF3Q9UPY6 502 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 HDAC5Q9UQL6 1122 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 X6R8D5 127 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 FOXN3O00409 490 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 OPHN1O60890 802 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 HMMRO75330 724 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ENTPD3O75355 529 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ACTL6BO94805 426 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 PRKCBP05771 671 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 HOXB7P09629 217 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 MTHFD2P13995 350 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 MALP21145 153 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 MST1P26927 711 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 PPARAQ07869 468 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 GRM4Q14833 912 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 NOLC1Q14978 699 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMC6-208ENST00000481708 CRTC1Q6UUV9 634 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 WDTC1Q8N5D0 677 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 FBXO18Q8NFZ0 1043 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 OR14C36Q8NHC7 312 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 SLC22A17Q8WUG5 538 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 RAX2Q96IS3 184 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 YIPF2Q9BWQ6 316 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 PLA2G12BQ9BX93 195 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 VPS16Q9H269 839 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 NELFAQ9H3P2 528 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 ZNF552Q9H707 407 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 RMI1Q9H9A7 625 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 PRDM5Q9NQX1 630 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 RBPJLQ9UBG7 517 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 COG5Q9UP83 839 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 CLCA2Q9UQC9 943 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 TIMM13Q9Y5L4 95 aaPredicted RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 PDS5AQ29RF7 1337 aaKnown RBP3.62□□□□□ -1.83
SMC6-208ENST00000481708 KIAA1217Q5T5P2 1943 aa3.62□□□□□ -1.83
SMC6-208ENST00000481708 FAM90A18PA6NE21 464 aa3.61□□□□□ -1.83
SMC6-208ENST00000481708 FAM90A16PA6NEW6 464 aa3.61□□□□□ -1.83
SMC6-208ENST00000481708 FAM170BA6NMN3 283 aa3.61□□□□□ -1.83
SMC6-208ENST00000481708 FAM90A9PA6NNJ1 464 aa3.61□□□□□ -1.83
SMC6-208ENST00000481708 FAM90A5PA8MXJ8 464 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms