RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 SHOC2Q9UQ13 582 aa4.1□□□□□ -1.75
UBE2F-221ENST00000480828 CNTN6Q9UQ52 1028 aa4.1□□□□□ -1.75
UBE2F-221ENST00000480828 DERAQ9Y315 318 aa4.1□□□□□ -1.75
UBE2F-221ENST00000480828 CCDC196A0A1B0GTZ2 297 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 CCDC78A2IDD5 438 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 AGPSO00116 658 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 LAMTOR5O43504 91 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 CER1O95813 267 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 CNPP09543 421 aaKnown RBP4.09□□□□□ -1.75
UBE2F-221ENST00000480828 ATXN1LP0C7T5 689 aaKnown RBP4.09□□□□□ -1.75
UBE2F-221ENST00000480828 CPA1P15085 419 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 ABCD3P28288 659 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 SERPINA4P29622 427 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 KRT20P35900 424 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 GCLCP48506 637 aaPredicted RBP4.09□□□□□ -1.75
UBE2F-221ENST00000480828 POLD2P49005 469 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 PXNP49023 591 aaPredicted RBP4.09□□□□□ -1.75
UBE2F-221ENST00000480828 CCR9P51686 369 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 DGKEP52429 567 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 EPHB4P54760 987 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 MC2RQ01718 297 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 FHL3Q13643 280 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 ERV3-1Q14264 604 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 CCNG2Q16589 344 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 CCDC96Q2M329 555 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 TRIM60Q495X7 471 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 LAYNQ6UX15 382 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 TMEM108Q6UXF1 575 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 SYNE3Q6ZMZ3 975 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 ENOSF1Q7L5Y1 443 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 RASGRP2Q7LDG7 609 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 GPRIN1Q7Z2K8 1008 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 GPR135Q8IZ08 494 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 Q8N1X5 172 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 GPATCH11Q8N954 259 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 TBC1D22AQ8WUA7 517 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 SDCCAG3Q96C92 435 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 RNF125Q96EQ8 232 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 TMEM176AQ96HP8 235 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 CPPED1Q9BRF8 314 aaPredicted RBP4.09□□□□□ -1.75
UBE2F-221ENST00000480828 MEGF9Q9H1U4 602 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 RMI1Q9H9A7 625 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 ANKEF1Q9NU02 776 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 POGKQ9P215 609 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 PI4KBQ9UBF8 816 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 DNAJB11Q9UBS4 358 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 VPS51Q9UID3 782 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 ST6GALNAC2Q9UJ37 374 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 HDAC5Q9UQL6 1122 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 RAD54BQ9Y620 910 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 CYP46A1Q9Y6A2 500 aa4.09□□□□□ -1.75
UBE2F-221ENST00000480828 PI4KAP2A4QPH2 592 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 VWA3AA6NCI4 1184 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 FAM90A20PA6NIJ5 464 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 DRGXA6NNA5 263 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 PRR5-ARHGAP8B1AHC4 643 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 ADM5C9JUS6 153 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 F5H0A9 414 aaPredicted RBP4.08□□□□□ -1.76
UBE2F-221ENST00000480828 CD3EAPO15446 510 aaKnown RBP4.08□□□□□ -1.76
UBE2F-221ENST00000480828 KLK10O43240 276 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 AKAP8O43823 692 aaKnown RBP4.08□□□□□ -1.76
UBE2F-221ENST00000480828 ORC4O43929 436 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 HK1P19367 917 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 RPS6KB1P23443 525 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 GGT5P36269 586 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 LOXL3P58215 753 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 PIGFQ07326 219 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 TDGQ13569 410 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 R3HDM1Q15032 1099 aaKnown RBP4.08□□□□□ -1.76
UBE2F-221ENST00000480828 ZNF568Q3ZCX4 644 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 LRRC24Q50LG9 513 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 ZNF484Q5JVG2 852 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 WDR45BQ5MNZ6 344 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 EFCAB12Q6NXP0 572 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 FAM111BQ6SJ93 734 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.08□□□□□ -1.76
UBE2F-221ENST00000480828 B4GALNT4Q76KP1 1039 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 DOK3Q7L591 496 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 R3HCC1LQ7Z5L2 792 aaKnown RBP4.08□□□□□ -1.76
UBE2F-221ENST00000480828 SYT12Q8IV01 421 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 KBTBD2Q8IY47 623 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 SPARTQ8N0X7 666 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 GALNT4Q8N4A0 578 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.08□□□□□ -1.76
UBE2F-221ENST00000480828 LINS1Q8NG48 757 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 HMGB4Q8WW32 186 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 CPT1BQ92523 772 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 NEU1Q99519 415 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 TREX2Q9BQ50 279 aaPredicted RBP4.08□□□□□ -1.76
UBE2F-221ENST00000480828 C12orf65Q9H3J6 166 aaKnown RBP4.08□□□□□ -1.76
UBE2F-221ENST00000480828 PRDM13Q9H4Q3 707 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 UNKLQ9H9P5 680 aaKnown RBP4.08□□□□□ -1.76
UBE2F-221ENST00000480828 IL21RQ9HBE5 538 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 NOD2Q9HC29 1040 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 NDUFAF4Q9P032 175 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 HSFX1Q9UBD0 423 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 TBC1D29Q9UFV1 150 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 TBX20Q9UMR3 447 aa4.08□□□□□ -1.76
UBE2F-221ENST00000480828 LMTK3Q96Q04 1460 aa4.07□□□□□ -1.76
UBE2F-221ENST00000480828 AATKQ6ZMQ8 1374 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms