RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 DAOAP59103 153 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 FMO1Q01740 532 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 ARID5AQ03989 594 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 ASIC2Q16515 512 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 KLHDC10Q6PID8 442 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 SCD5Q86SK9 330 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 C1orf131Q8NDD1 294 aaKnown RBP20.74■□□□□ 0.91
LIME1-205ENST00000480139 CDK5RAP1Q96SZ6 601 aaKnown RBP20.74■□□□□ 0.91
LIME1-205ENST00000480139 NMUR1Q9HB89 426 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 TRPC7Q9HCX4 862 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 ST7Q9NRC1 585 aa20.74■□□□□ 0.91
LIME1-205ENST00000480139 KIF26AQ9ULI4 1882 aaPredicted RBP20.74■□□□□ 0.91
LIME1-205ENST00000480139 LUC7L2Q9Y383 392 aaKnown RBP20.74■□□□□ 0.91
LIME1-205ENST00000480139 A0A1W2PQH9 124 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 ABL1P00519 1130 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 CYP1A1P04798 512 aaPredicted RBP20.73■□□□□ 0.91
LIME1-205ENST00000480139 CKMP06732 381 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 LCP1P13796 627 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 TCF3P15923 654 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 HDCP19113 662 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 PGFP49763 221 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 NOMO3P69849 1222 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 SLC7A9P82251 487 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 TANGO2Q6ICL3 276 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 TADA2BQ86TJ2 420 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 ARL14EPQ8N8R7 260 aaPredicted RBP20.73■□□□□ 0.91
LIME1-205ENST00000480139 MRFAP1L1Q96HT8 127 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 PPP1R13BQ96KQ4 1090 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 SLC22A12Q96S37 553 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 CPXM1Q96SM3 734 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 SYT11Q9BT88 431 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 TDP1Q9NUW8 608 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.73■□□□□ 0.912e-9■■□□□ 13.4
LIME1-205ENST00000480139 OSER1Q9NX31 292 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 NAGPAQ9UK23 515 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 ARHGAP26Q9UNA1 814 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 SORCS3Q9UPU3 1222 aa20.73■□□□□ 0.91
LIME1-205ENST00000480139 TTC28Q96AY4 2481 aa20.72■□□□□ 0.91
LIME1-205ENST00000480139 E5RJQ4 531 aa20.72■□□□□ 0.91
LIME1-205ENST00000480139 TLR5O60602 858 aa20.72■□□□□ 0.91
LIME1-205ENST00000480139 PRAMEF12O95522 483 aa20.72■□□□□ 0.91
LIME1-205ENST00000480139 CASP14P31944 242 aa20.72■□□□□ 0.91
LIME1-205ENST00000480139 YWHAGP61981 247 aaKnown RBP eCLIP20.72■□□□□ 0.91
LIME1-205ENST00000480139 ARID5BQ14865 1188 aa20.72■□□□□ 0.91
LIME1-205ENST00000480139 E4F1Q66K89 784 aaPredicted RBP20.72■□□□□ 0.91
LIME1-205ENST00000480139 CELF5Q8N6W0 485 aaKnown RBP20.72■□□□□ 0.91
LIME1-205ENST00000480139 IPO4Q8TEX9 1081 aaKnown RBP20.72■□□□□ 0.91
LIME1-205ENST00000480139 DEPDC1BQ8WUY9 529 aa20.72■□□□□ 0.91
LIME1-205ENST00000480139 USP13Q92995 863 aaPredicted RBP20.72■□□□□ 0.91
LIME1-205ENST00000480139 CYP2S1Q96SQ9 504 aa20.72■□□□□ 0.91
LIME1-205ENST00000480139 AGPAT1Q99943 283 aa20.72■□□□□ 0.91
LIME1-205ENST00000480139 CCSER2Q9H7U1 834 aa20.72■□□□□ 0.91
LIME1-205ENST00000480139 MYO10Q9HD67 2058 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 YJEFN3A6XGL0 299 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 E7ENQ6 273 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 PAPSS1O43252 624 aaPredicted RBP20.71■□□□□ 0.91
LIME1-205ENST00000480139 COCHO43405 550 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 ASGR2P07307 311 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 TPM1P09493 284 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 RALAP11233 206 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 RARGP13631 454 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 GABRB2P47870 512 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 ZNF75DP51815 510 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 TDGQ13569 410 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 PTPN20Q4JDL3 420 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 ZDHHC17Q8IUH5 632 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 GPIHBP1Q8IV16 184 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 SCUBE3Q8IX30 993 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 SLC44A3Q8N4M1 653 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 KIAA1958Q8N8K9 716 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 MSANTD4Q8NCY6 345 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 CPLX3Q8WVH0 158 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 RSAD2Q8WXG1 361 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 KXD1Q9BQD3 176 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 TRIM62Q9BVG3 475 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 MIS12Q9H081 205 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 RNF38Q9H0F5 515 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 ABCC13Q9NSE7 274 aa20.71■□□□□ 0.91
LIME1-205ENST00000480139 BZW2Q9Y6E2 419 aaKnown RBP20.71■□□□□ 0.91
LIME1-205ENST00000480139 HEPACAM2A8MVW5 462 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 PIK3R2O00459 728 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 DPYSL4O14531 572 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 UNGP13051 313 aaPredicted RBP20.7■□□□□ 0.9
LIME1-205ENST00000480139 PSMC3P17980 439 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 HNRNPH3P31942 346 aaKnown RBP20.7■□□□□ 0.9
LIME1-205ENST00000480139 ATP5C1P36542 298 aaKnown RBP20.7■□□□□ 0.9
LIME1-205ENST00000480139 VIPR2P41587 438 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 FCHO2Q0JRZ9 810 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 NAA35Q5VZE5 725 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 VITQ6UXI7 678 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 BEND5Q7L4P6 421 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 MFSD6LQ8IWD5 586 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 GOLGA1Q92805 767 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 RSPRY1Q96DX4 576 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 DNAJC7Q99615 494 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 HAUS4Q9H6D7 363 aa20.7■□□□□ 0.9
LIME1-205ENST00000480139 OLA1Q9NTK5 396 aaKnown RBP20.7■□□□□ 0.9
LIME1-205ENST00000480139 LTFP02788 710 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 ERBB2P04626 1255 aa20.69■□□□□ 0.9
LIME1-205ENST00000480139 GLI1P08151 1106 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms