RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 B3GALNT2Q8NCR0 500 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 GLIS3Q8NEA6 775 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 MYCBPAPQ8TBZ2 947 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 SNX21Q969T3 373 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 PCED1BQ96HM7 432 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 MRPL45Q9BRJ2 306 aaKnown RBP7.52□□□□□ -1.21
COL17A1-205ENST00000480127 STRA6Q9BX79 667 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 NUSAP1Q9BXS6 441 aaKnown RBP7.52□□□□□ -1.21
COL17A1-205ENST00000480127 USP25Q9UHP3 1055 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 SERTAD1Q9UHV2 236 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 PILRBQ9UKJ0 227 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 PCDHA7Q9UN72 937 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 ARHGAP26Q9UNA1 814 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 PTPRJQ12913 1337 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 ATXN2Q99700 1313 aaKnown RBP7.52□□□□□ -1.21
COL17A1-205ENST00000480127 THADAQ6YHU6 1953 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 LAMA1P25391 3075 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 PTPRDP23468 1912 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 TNRC6BQ9UPQ9 1833 aaKnown RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 A0A0A0MRY4 1105 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 A0A1B0GVL5 298 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 SGK1O00141 431 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 LEFTY2O00292 366 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 ADAM23O75077 832 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 KLF8O95600 359 aaPredicted RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 APODP05090 189 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 CYP17A1P05093 508 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 SLFN14P0C7P3 912 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 PFKFB1P16118 471 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 ITPKAP23677 461 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 RPL13P26373 211 aaKnown RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 KIR2DL1P43626 348 aaPredicted RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 SLC6A11P48066 632 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 SLC8A3P57103 927 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 KDSRQ06136 332 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 TAF10Q12962 218 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 ANO4Q32M45 955 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 SOWAHCQ53LP3 525 aaPredicted RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 SPDYCQ5MJ68 293 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 EMC10Q5UCC4 262 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 RESP18Q5W5W9 173 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 LYSMD4Q5XG99 296 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 RAB44Q7Z6P3 723 aaPredicted RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 FILIP1Q7Z7B0 1213 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 ADGRG2Q8IZP9 1017 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 NUP93Q8N1F7 819 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 CHCHD4Q8N4Q1 142 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 TXNDC5Q8NBS9 432 aaKnown RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 PDZD8Q8NEN9 1154 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 CXorf38Q8TB03 319 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 ZNF507Q8TCN5 953 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 WHAMMQ8TF30 809 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 SCFD1Q8WVM8 642 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 SMARCD1Q96GM5 515 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 SPACA7Q96KW9 195 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 SPATA17Q96L03 361 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 DMAP1Q9NPF5 467 aaPredicted RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 CRTAC1Q9NQ79 661 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 KRT82Q9NSB4 513 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 CFAP97Q9P2B7 532 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 HOOK1Q9UJC3 728 aaKnown RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 LSM7Q9UK45 103 aaKnown RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 GPSM3Q9Y4H4 160 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 CPQQ9Y646 472 aa7.51□□□□□ -1.21
COL17A1-205ENST00000480127 MORC2Q9Y6X9 1032 aaPredicted RBP7.51□□□□□ -1.21
COL17A1-205ENST00000480127 ASCC3Q8N3C0 2202 aaKnown RBP7.5□□□□□ -1.21
COL17A1-205ENST00000480127 TBC1D3BA6NDS4 549 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 H0Y626 953 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 CLDN5O00501 218 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 GABRDO14764 452 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 TACC1O75410 805 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 TRIM16O95361 564 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 NR3C1P04150 777 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 RPN1P04843 607 aaKnown RBP7.5□□□□□ -1.21
COL17A1-205ENST00000480127 CFIP05156 583 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 FAM200BP0CF97 657 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 CD59P13987 128 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 CD58P19256 250 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 ADORA2BP29275 332 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 HOXD12P35452 270 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 TIE1P35590 1138 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 DPP6P42658 865 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 CASP4P49662 377 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 BECN1Q14457 450 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 DHCR24Q15392 516 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 E2F4Q16254 413 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 DUOXA1Q1HG43 343 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 SGSM1Q2NKQ1 1148 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 KMT5BQ4FZB7 885 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 HSF5Q4G112 596 aaPredicted RBP7.5□□□□□ -1.21
COL17A1-205ENST00000480127 HECTD3Q5T447 861 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 TCERG1LQ5VWI1 586 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 SDE2Q6IQ49 451 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 FAM171BQ6P995 826 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 RHBDF2Q6PJF5 856 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 C19orf48Q6RUI8 117 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 RSRC2Q7L4I2 434 aaKnown RBP7.5□□□□□ -1.21
COL17A1-205ENST00000480127 TADA2BQ86TJ2 420 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 ACOT1Q86TX2 421 aa7.5□□□□□ -1.21
COL17A1-205ENST00000480127 C12orf40Q86WS4 652 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms