RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SPAARA0A1B0GVQ0 90 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 VPS37CA5D8V6 355 aaPredicted RBP11.01□□□□□ -0.65
SMURF1-204ENST00000480055 ANTXRLA6NF34 631 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SLC9A3R1O14745 358 aaPredicted RBP11.01□□□□□ -0.65
SMURF1-204ENST00000480055 GABRDO14764 452 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SCAMP3O14828 347 aaKnown RBP11.01□□□□□ -0.65
SMURF1-204ENST00000480055 CLSTN1O94985 981 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 KLF8O95600 359 aaPredicted RBP11.01□□□□□ -0.65
SMURF1-204ENST00000480055 F12P00748 615 aaPredicted RBP11.01□□□□□ -0.65
SMURF1-204ENST00000480055 CAPNS1P04632 268 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 APODP05090 189 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 HNRNPLP14866 589 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMURF1-204ENST00000480055 ENGP17813 658 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 DPP6P42658 865 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 MAGEA11P43364 429 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SLC6A11P48066 632 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 MRPS21P82921 87 aaKnown RBP11.01□□□□□ -0.65
SMURF1-204ENST00000480055 IFRD2Q12894 506 aaPredicted RBP11.01□□□□□ -0.65
SMURF1-204ENST00000480055 RESTQ13127 1097 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 FAM171BQ6P995 826 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SLC23A3Q6PIS1 610 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 VSTM1Q6UX27 236 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 USP49Q70CQ1 688 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 DPH6Q7L8W6 267 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 PROSER1Q86XN7 944 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SYT12Q8IV01 421 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 TMEFF1Q8IYR6 380 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 GPD1LQ8N335 351 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 TXNDC5Q8NBS9 432 aaKnown RBP11.01□□□□□ -0.65
SMURF1-204ENST00000480055 WHAMMQ8TF30 809 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 HMGB4Q8WW32 186 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 RLN3Q8WXF3 142 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SPATA17Q96L03 361 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 FNBP1Q96RU3 617 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 PNKPQ96T60 521 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 CBWD1Q9BRT8 395 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 STRA6Q9BX79 667 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SNX25Q9H3E2 840 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 TMEM74BQ9NUR3 256 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 PANK4Q9NVE7 773 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SIX4Q9UIU6 781 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 CPQQ9Y646 472 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 CLIC4Q9Y696 253 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SHROOM3Q8TF72 1996 aa11.01□□□□□ -0.65
SMURF1-204ENST00000480055 SETXQ7Z333 2677 aaKnown RBP11.01□□□□□ -0.65
SMURF1-204ENST00000480055 H0Y626 953 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 PRPF6O94906 941 aaKnown RBP11□□□□□ -0.65
SMURF1-204ENST00000480055 KAT7O95251 611 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 TRIM16O95361 564 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 CYP17A1P05093 508 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 MBL2P11226 248 aaPredicted RBP11□□□□□ -0.65
SMURF1-204ENST00000480055 PFKLP17858 780 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 HOXD12P35452 270 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 GNL1P36915 607 aaPredicted RBP11□□□□□ -0.65
SMURF1-204ENST00000480055 STAT6P42226 847 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 PTGER3P43115 390 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 PPP3CCP48454 512 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 CASP5P51878 434 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 ATXN3P54252 364 aaPredicted RBP11□□□□□ -0.65
SMURF1-204ENST00000480055 SIM1P81133 766 aaPredicted RBP11□□□□□ -0.65
SMURF1-204ENST00000480055 CEBPZQ03701 1054 aaKnown RBP11□□□□□ -0.65
SMURF1-204ENST00000480055 KDSRQ06136 332 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 ALCAMQ13740 583 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 BYSLQ13895 437 aaKnown RBP11□□□□□ -0.65
SMURF1-204ENST00000480055 DHCR24Q15392 516 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 SURF1Q15526 300 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 DUOXA2Q1HG44 320 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 MDH1BQ5I0G3 518 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 SPDYCQ5MJ68 293 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 EOGTQ5NDL2 527 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 TDRD10Q5VZ19 366 aaKnown RBP11□□□□□ -0.65
SMURF1-204ENST00000480055 STXBP4Q6ZWJ1 553 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 ADGRG2Q8IZP9 1017 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 OR6B3Q8NGW1 331 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 CLIC6Q96NY7 704 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 RNF38Q9H0F5 515 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 CRTAC1Q9NQ79 661 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 ARHGEF4Q9NR80 690 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 INTS13Q9NVM9 706 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 CFAP97Q9P2B7 532 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 MBD1Q9UIS9 605 aaPredicted RBP11□□□□□ -0.65
SMURF1-204ENST00000480055 ATXN2Q99700 1313 aaKnown RBP11□□□□□ -0.65
SMURF1-204ENST00000480055 TMEM131Q92545 1883 aa11□□□□□ -0.65
SMURF1-204ENST00000480055 TCRBV21S2A2A0A5A6 115 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 ZNF840PA6NDX5 716 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 ZNF233A6NK53 670 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 SGK1O00141 431 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 ADH1CP00326 375 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 CFIP05156 583 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 GRIA2P42262 883 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 SLC7A9P82251 487 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 ZXDBP98169 803 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 TAF10Q12962 218 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 HSF5Q4G112 596 aaPredicted RBP10.99□□□□□ -0.65
SMURF1-204ENST00000480055 EMC10Q5UCC4 262 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 LYSMD4Q5XG99 296 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 BTBD8Q5XKL5 378 aa10.99□□□□□ -0.65
SMURF1-204ENST00000480055 CCDC73Q6ZRK6 1079 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms