RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ARFGAP1Q8N6T3 406 aa13.87□□□□□ -0.19
PDZRN3-208ENST00000479530 FAM71DQ8N9W8 422 aa13.87□□□□□ -0.19
PDZRN3-208ENST00000479530 AZIN2Q96A70 460 aa13.87□□□□□ -0.19
PDZRN3-208ENST00000479530 C20orf27Q9GZN8 174 aa13.87□□□□□ -0.19
PDZRN3-208ENST00000479530 DDX43Q9NXZ2 648 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-208ENST00000479530 HOXC10Q9NYD6 342 aa13.87□□□□□ -0.19
PDZRN3-208ENST00000479530 PPARGC1AQ9UBK2 798 aaKnown RBP13.87□□□□□ -0.19
PDZRN3-208ENST00000479530 FETUBQ9UGM5 382 aa13.87□□□□□ -0.19
PDZRN3-208ENST00000479530 STRIP2Q9ULQ0 834 aa13.87□□□□□ -0.19
PDZRN3-208ENST00000479530 E7ESA3 106 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 BASP1P80723 227 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 LRRC36Q1X8D7 754 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 SLFN12LQ6IEE8 588 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 DENND1BQ6P3S1 775 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 RAPH1Q70E73 1250 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 ARID3BQ8IVW6 561 aaPredicted RBP13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 SCUBE1Q8IWY4 988 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 ULK2Q8IYT8 1036 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 RNF149Q8NC42 400 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 CFAP61Q8NHU2 1237 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 ALKBH8Q96BT7 664 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 PPP1R16BQ96T49 567 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 UBE2OQ9C0C9 1292 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 NXF1Q9UBU9 619 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 MEI4A8MW99 385 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 A8MXQ7 604 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 C19orf81C9J6K1 198 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 KBTBD13C9JR72 458 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 FZD9O00144 591 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 CDC16Q13042 620 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 DNAJC24Q6P3W2 148 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 TRIM72Q6ZMU5 477 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 CCDC110Q8TBZ0 833 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 SRPK1Q96SB4 655 aaKnown RBP13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 ECSITQ9BQ95 431 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 AGTPBP1Q9UPW5 1226 aa13.86□□□□□ -0.19
PDZRN3-208ENST00000479530 SSC5DA1L4H1 1573 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 PARP14Q460N5 1801 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 H0YCG3 227 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 SPATA31D3P0C874 917 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 ICAM3P32942 547 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 RFC1P35251 1148 aaPredicted RBP13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 DSG1Q02413 1049 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 BST1Q10588 318 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 RASIP1Q5U651 963 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 EEF1DP3Q658K8 133 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 SPATA31D4Q6ZUB0 917 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 NCAPG2Q86XI2 1143 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 TMPRSS6Q8IU80 811 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 BRSK2Q8IWQ3 736 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 EMC1Q8N766 993 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 JOSD2Q8TAC2 188 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 COPS5Q92905 334 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 EBF3Q9H4W6 596 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 PDP2Q9P2J9 529 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 ARID2Q68CP9 1835 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 DNAH12Q6ZR08 3092 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 ZBTB42B2RXF5 422 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 MAGEC1O60732 1142 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 USP2O75604 605 aaPredicted RBP13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 SORBS2O94875 1100 aaKnown RBP13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 ALDH18A1P54886 795 aaKnown RBP13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 SLC18A2Q05940 514 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 LAMTOR4Q0VGL1 99 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 CUL3Q13618 768 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 UBAP2LQ14157 1087 aaKnown RBP13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 TAF5Q15542 800 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 RAB6CQ53S08 254 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 MYLK4Q86YV6 388 aaPredicted RBP13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 PDIK1LQ8N165 341 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 RSAD2Q8WXG1 361 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 EZH1Q92800 747 aaPredicted RBP13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 ACAP3Q96P50 834 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 ACO2Q99798 780 aaKnown RBP13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 RAB6CQ9H0N0 254 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 MINDY3Q9H8M7 445 aa13.85□□□□□ -0.19
PDZRN3-208ENST00000479530 PRR5-ARHGAP8B1AHC4 643 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 TM7SF2O76062 418 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 TOP3BO95985 862 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 PYGLP06737 847 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 IQCF3P0C7M6 154 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 ACTR3P61158 418 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 ARHGAP8P85298 464 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 ENPEPQ07075 957 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 VGLL4Q14135 290 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 ZRSR2Q15696 482 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 LRRC38Q5VT99 294 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 RNF111Q6ZNA4 994 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 PCGF5Q86SE9 256 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 GSTCDQ8NEC7 633 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 SLC44A1Q8WWI5 657 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 EBF4Q9BQW3 602 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 SPATA16Q9BXB7 569 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 PHIPQ8WWQ0 1821 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 CXorf49A8MYA2 514 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 MAFO75444 373 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 LDHAP00338 332 aaKnown RBP13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 TBXAS1P24557 533 aaPredicted RBP13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 AQP5P55064 265 aa13.84□□□□□ -0.19
PDZRN3-208ENST00000479530 YWHAGP61981 247 aaKnown RBP eCLIP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms