RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 RNF139Q8WU17 664 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 DDX1Q92499 740 aaKnown RBP11.95□□□□□ -0.5
SRRT-211ENST00000478693 NDRG1Q92597 394 aaKnown RBP11.95□□□□□ -0.5
SRRT-211ENST00000478693 E2F7Q96AV8 911 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 ELSPBP1Q96BH3 223 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 CDK5RAP1Q96SZ6 601 aaKnown RBP11.95□□□□□ -0.5
SRRT-211ENST00000478693 LHX5Q9H2C1 402 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 CCSER2Q9H7U1 834 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 NMUR1Q9HB89 426 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 CD320Q9NPF0 282 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 TDP1Q9NUW8 608 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 SMPD4Q9NXE4 827 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 MUTYHQ9UIF7 546 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 SORCS3Q9UPU3 1222 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 CPQQ9Y646 472 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 MYO16Q9Y6X6 1858 aa11.95□□□□□ -0.5
SRRT-211ENST00000478693 SOBPA7XYQ1 873 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 ANHXE9PGG2 379 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 CAPN9O14815 690 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 COCHO43405 550 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 OAS1P00973 400 aaKnown RBP11.94□□□□□ -0.5
SRRT-211ENST00000478693 IRF1P10914 325 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 TNFAIP3P21580 790 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 FCARP24071 287 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 ATP5C1P36542 298 aaKnown RBP11.94□□□□□ -0.5
SRRT-211ENST00000478693 NSFP46459 744 aaKnown RBP11.94□□□□□ -0.5
SRRT-211ENST00000478693 NOMO3P69849 1222 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 TDGQ13569 410 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 CC2D1AQ6P1N0 951 aaPredicted RBP11.94□□□□□ -0.5
SRRT-211ENST00000478693 TOGARAM2Q6ZUX3 1019 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 VPS36Q86VN1 386 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 ERICH1Q86X53 443 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 DDX42Q86XP3 938 aaKnown RBP eCLIP11.94□□□□□ -0.5
SRRT-211ENST00000478693 CELF5Q8N6W0 485 aaKnown RBP11.94□□□□□ -0.5
SRRT-211ENST00000478693 BPIFB1Q8TDL5 484 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 DEPDC1BQ8WUY9 529 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 CPA5Q8WXQ8 436 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 IRGQQ8WZA9 623 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 USP13Q92995 863 aaPredicted RBP11.94□□□□□ -0.5
SRRT-211ENST00000478693 SLC22A12Q96S37 553 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 CPXM1Q96SM3 734 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 CYP2S1Q96SQ9 504 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 AGPAT1Q99943 283 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 TRIM62Q9BVG3 475 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 HAUS4Q9H6D7 363 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 CYLDQ9NQC7 956 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 ZNHIT6Q9NWK9 470 aaKnown RBP11.94□□□□□ -0.5
SRRT-211ENST00000478693 THG1LQ9NWX6 298 aaKnown RBP11.94□□□□□ -0.5
SRRT-211ENST00000478693 CYTH4Q9UIA0 394 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 NUDT5Q9UKK9 219 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 STRIP2Q9ULQ0 834 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 CAPN11Q9UMQ6 739 aa11.94□□□□□ -0.5
SRRT-211ENST00000478693 YJEFN3A6XGL0 299 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 E7ENQ6 273 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 MDM4O15151 490 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 AP5Z1O43299 807 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 LTFP02788 710 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 ERBB2P04626 1255 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 ZDHHC11BP0C7U3 371 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 PSMC3P17980 439 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 PGFP49763 221 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 ZNF75DP51815 510 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 EFEMP1Q12805 493 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 ZNF268Q14587 947 aaPredicted RBP11.93□□□□□ -0.5
SRRT-211ENST00000478693 MTF1Q14872 753 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 PTPN20Q4JDL3 420 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 SNX30Q5VWJ9 437 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 BSPRYQ5W0U4 402 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 PM20D1Q6GTS8 502 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 POTEHQ6S545 545 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 VITQ6UXI7 678 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 FAM183BPQ6ZVS7 135 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 SCD5Q86SK9 330 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 MIB1Q86YT6 1006 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 SCUBE3Q8IX30 993 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 DRC7Q8IY82 874 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 SCML4Q8N228 414 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 SH3RF2Q8TEC5 729 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 EDEM1Q92611 657 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 C11orf70Q9BRQ4 267 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.93□□□□□ -0.5
SRRT-211ENST00000478693 TRMT61BQ9BVS5 477 aaKnown RBP11.93□□□□□ -0.5
SRRT-211ENST00000478693 COL25A1Q9BXS0 654 aaPredicted RBP11.93□□□□□ -0.5
SRRT-211ENST00000478693 SLC4A5Q9BY07 1137 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 BRD9Q9H8M2 597 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 TRPV4Q9HBA0 871 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 ABCC13Q9NSE7 274 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 OLA1Q9NTK5 396 aaKnown RBP11.93□□□□□ -0.5
SRRT-211ENST00000478693 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.93□□□□□ -0.5
SRRT-211ENST00000478693 OSER1Q9NX31 292 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 OBP2AQ9NY56 170 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 CLIC5Q9NZA1 410 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 AIPL1Q9NZN9 384 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 TJP2Q9UDY2 1190 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 DNMT3LQ9UJW3 386 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 LSM7Q9UK45 103 aaKnown RBP11.93□□□□□ -0.5
SRRT-211ENST00000478693 FBXL21Q9UKT6 434 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 ARHGAP26Q9UNA1 814 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 DUSP12Q9UNI6 340 aa11.93□□□□□ -0.5
SRRT-211ENST00000478693 CCL26Q9Y258 94 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms