RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 C2orf81A6NN90 581 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 QSOX1O00391 747 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SEMA3EO15041 775 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 FGFR1P11362 822 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 YY1P25490 414 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 STAT3P40763 770 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 RPL21P46778 160 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 RENBPP51606 427 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 OGFOD2Q6N063 350 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 MAEAQ7L5Y9 396 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SMIM15Q7Z3B0 74 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 NET1Q7Z628 596 aaPredicted RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 CIR1Q86X95 450 aaPredicted RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 TP53INP1Q96A56 240 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 DYDC2Q96IM9 177 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SLC38A2Q96QD8 506 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 CDC6Q99741 560 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ESYT1Q9BSJ8 1104 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 NFKBIZQ9BYH8 718 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ZDHHC4Q9NPG8 344 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 MTMR10Q9NXD2 777 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 PDP2Q9P2J9 529 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 NIP7Q9Y221 180 aaKnown RBP eCLIP5.59□□□□□ -1.51
USF3-202ENST00000478658 ZFYVE9O95405 1425 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 NCAPD2Q15021 1401 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 ANKARQ7Z5J8 1434 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 MAGEA13PA6NCF6 341 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SAGE2PA6NJ88 616 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 TLX3O43711 291 aaPredicted RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 CABYRO75952 493 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 CBSLP0DN79 551 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 TCEA1P23193 301 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 PDIA3P30101 505 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 CBSP35520 551 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 CASRP41180 1078 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SLC7A2P52569 658 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SEC23AQ15436 765 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 AGAP9Q5VTM2 703 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SCN4BQ8IWT1 228 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 CNOT9Q92600 299 aaKnown RBP5.59□□□□□ -1.51
USF3-202ENST00000478658 SPACA7Q96KW9 195 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 GANQ9H2C0 597 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 CRTAC1Q9NQ79 661 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 IP6K2Q9UHH9 426 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 SLC30A1Q9Y6M5 507 aa5.59□□□□□ -1.51
USF3-202ENST00000478658 TOP2AP11388 1531 aaKnown RBP5.59□□□□□ -1.52
USF3-202ENST00000478658 PLXNC1O60486 1568 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 NR5A2O00482 541 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 PRPF3O43395 683 aaKnown RBP5.59□□□□□ -1.52
USF3-202ENST00000478658 PSTPIP1O43586 416 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 WFS1O76024 890 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 OR7A10O76100 309 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 IFNGP01579 166 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 PET100P0DJ07 73 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 UBE3AQ05086 875 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 C1QBPQ07021 282 aaKnown RBP5.59□□□□□ -1.52
USF3-202ENST00000478658 AARDQ4LEZ3 155 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 ATCAYQ86WG3 371 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 HID1Q8IV36 788 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 HERC6Q8IVU3 1022 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 MAPKAPK5Q8IW41 473 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 FDXACB1Q9BRP7 624 aaPredicted RBP5.59□□□□□ -1.52
USF3-202ENST00000478658 TMX1Q9H3N1 280 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 PRR12Q9ULL5 1215 aa5.59□□□□□ -1.52
USF3-202ENST00000478658 ATG7O95352 703 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 SERPIND1P05546 499 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 UQCRFS1P47985 274 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 OLFML2AQ68BL7 652 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 RAD9BQ6WBX8 426 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PHACTR4Q8IZ21 702 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 PRR22Q8IZ63 422 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CAVIN3Q969G5 261 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 CHID1Q9BWS9 393 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 LRRC4BQ9NT99 713 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 SPASTQ9UBP0 616 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 AASSQ9UDR5 926 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ATG4BQ9Y4P1 393 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 FANCAO15360 1455 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ZNF644Q9H582 1327 aaPredicted RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 ANKRD50Q9ULJ7 1429 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 C3orf70A6NLC5 250 aaPredicted RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 TNFRSF10BO14763 440 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 NARSO43776 548 aaKnown RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 GLRA3O75311 464 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 HOXB9P17482 250 aaPredicted RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 HALP42357 657 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 SREBF2Q12772 1141 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 NR1D2Q14995 579 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 SF3B4Q15427 424 aaKnown RBP eCLIP5.58□□□□□ -1.52
USF3-202ENST00000478658 NFIL3Q16649 462 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 GXYLT1Q4G148 440 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 KLHL22Q53GT1 634 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 FAM76BQ5HYJ3 339 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ILDR2Q71H61 639 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.58□□□□□ -1.52
USF3-202ENST00000478658 SKA3Q8IX90 412 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 RHOT1Q8IXI2 618 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 NUP93Q8N1F7 819 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 OR5T3Q8NGG3 340 aa5.58□□□□□ -1.52
USF3-202ENST00000478658 ZHX1-C8orf76Q96EF9 292 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms