RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 GPC5P78333 572 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 ARID3BQ8IVW6 561 aaPredicted RBP28.17■■■□□ 2.1
CCM2-211ENST00000478582 WDTC1Q8N5D0 677 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 FLCNQ8NFG4 579 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 E2F7Q96AV8 911 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 ELSPBP1Q96BH3 223 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 SLC4A5Q9BY07 1137 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 ZFP14Q9HCL3 533 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 KRBA1A5PL33 1030 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 C2orf78A6NCI8 922 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 OLFM2O95897 454 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 ZBED1O96006 694 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 OAS1P00973 400 aaKnown RBP28.16■■■□□ 2.1
CCM2-211ENST00000478582 CCDC172P0C7W6 258 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 FERP16591 822 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 CDH5P33151 784 aaPredicted RBP28.16■■■□□ 2.1
CCM2-211ENST00000478582 ACADSBP45954 432 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 RGS7P49802 495 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 ADIGQ0VDE8 80 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 ZNF276Q8N554 614 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 ULBP1Q9BZM6 244 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 CNGB3Q9NQW8 809 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 OBP2AQ9NY56 170 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 CYTH4Q9UIA0 394 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 CA14Q9ULX7 337 aa28.16■■■□□ 2.1
CCM2-211ENST00000478582 TRAV19A0A0A6YYK7 116 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 USP17L7P0C7H9 530 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 AVPR1AP37288 418 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 PGFP49763 221 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 CDR2Q01850 454 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 CWF19L1Q69YN2 538 aaKnown RBP28.15■■■□□ 2.1
CCM2-211ENST00000478582 TANGO2Q6ICL3 276 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 SCD5Q86SK9 330 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 TMEM110Q86TL2 294 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 SIX6OS1Q8N1H7 587 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 TMEM105Q8N8V8 129 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 PRSS33Q8NF86 280 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 TRPC7Q9HCX4 862 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 AIPL1Q9NZN9 384 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 CEP83Q9Y592 693 aa28.15■■■□□ 2.1
CCM2-211ENST00000478582 LRRC53A6NM62 1247 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 AP5Z1O43299 807 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 ABL1P00519 1130 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 HDCP19113 662 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 ZNF268Q14587 947 aaPredicted RBP28.14■■■□□ 2.1
CCM2-211ENST00000478582 HECTD3Q5T447 861 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 IRF2BP2Q7Z5L9 587 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 ARHGAP18Q8N392 663 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 SLC22A12Q96S37 553 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 CYP2S1Q96SQ9 504 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 PLA2G2FQ9BZM2 168 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 NMUR1Q9HB89 426 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 CLIC5Q9NZA1 410 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 CAPN11Q9UMQ6 739 aa28.14■■■□□ 2.1
CCM2-211ENST00000478582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.14■■■□□ 2.1
CCM2-211ENST00000478582 ANAPC1Q9H1A4 1944 aa28.14■■■□□ 2.09
CCM2-211ENST00000478582 MUC6Q6W4X9 2439 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 A0A1W2PQH9 124 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 FBXO21O94952 628 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 LSM8O95777 96 aaKnown RBP28.13■■■□□ 2.09
CCM2-211ENST00000478582 MMEP08473 750 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 LCP1P13796 627 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 CHRNB2P17787 502 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 AOC1P19801 751 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 DAOAP59103 153 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 PDCLQ13371 301 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 TAF3Q5VWG9 929 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 BHLHA9Q7RTU4 235 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 PASD1Q8IV76 773 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 ARL14EPQ8N8R7 260 aaPredicted RBP28.13■■■□□ 2.09
CCM2-211ENST00000478582 TMEM35BQ8NCS4 154 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 IRGQQ8WZA9 623 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 NOX5Q96PH1 765 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 RNF38Q9H0F5 515 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 NUCKS1Q9H1E3 243 aaKnown RBP28.13■■■□□ 2.09
CCM2-211ENST00000478582 PDCL3Q9H2J4 239 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 ARHGEF3Q9NR81 526 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 TDP1Q9NUW8 608 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 OSER1Q9NX31 292 aa28.13■■■□□ 2.09
CCM2-211ENST00000478582 PRAMEF12O95522 483 aa28.12■■■□□ 2.09
CCM2-211ENST00000478582 VIPR2P41587 438 aa28.12■■■□□ 2.09
CCM2-211ENST00000478582 SLC7A9P82251 487 aa28.12■■■□□ 2.09
CCM2-211ENST00000478582 FMO1Q01740 532 aa28.12■■■□□ 2.09
CCM2-211ENST00000478582 ARID5AQ03989 594 aa28.12■■■□□ 2.09
CCM2-211ENST00000478582 SPECC1LQ69YQ0 1117 aa28.12■■■□□ 2.09
CCM2-211ENST00000478582 VSTM4Q8IW00 320 aa28.12■■■□□ 2.09
CCM2-211ENST00000478582 CELF5Q8N6W0 485 aaKnown RBP28.12■■■□□ 2.09
CCM2-211ENST00000478582 C1orf131Q8NDD1 294 aaKnown RBP28.12■■■□□ 2.09
CCM2-211ENST00000478582 SLC20A1Q8WUM9 679 aa28.12■■■□□ 2.09
CCM2-211ENST00000478582 USP13Q92995 863 aaPredicted RBP28.12■■■□□ 2.09
CCM2-211ENST00000478582 KIF9Q9HAQ2 790 aa28.12■■■□□ 2.09
CCM2-211ENST00000478582 ST7Q9NRC1 585 aa28.12■■■□□ 2.09
CCM2-211ENST00000478582 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.12■■■□□ 2.09
CCM2-211ENST00000478582 NUP210Q8TEM1 1887 aaPredicted RBP28.11■■■□□ 2.09
CCM2-211ENST00000478582 STK25O00506 426 aa28.11■■■□□ 2.09
CCM2-211ENST00000478582 PI15O43692 258 aa28.11■■■□□ 2.09
CCM2-211ENST00000478582 TCF3P15923 654 aa28.11■■■□□ 2.09
CCM2-211ENST00000478582 PTPN5P54829 565 aa28.11■■■□□ 2.09
CCM2-211ENST00000478582 ZBED6P86452 979 aa28.11■■■□□ 2.09
CCM2-211ENST00000478582 PLCB2Q00722 1185 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms