RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 COPB2P35606 906 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 CD96P40200 585 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 PIK3CAP42336 1068 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 NAMPTP43490 491 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ACTR2P61160 394 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 MAGOHP61326 146 aaKnown RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 PRKCEQ02156 737 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 CAV1Q03135 178 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 STRN3Q13033 797 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 CALCOCO2Q13137 446 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 EMC2Q15006 297 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 SIX1Q15475 284 aaPredicted RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 KCNMB1Q16558 191 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 LRIT3Q3SXY7 679 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 SUPT20HL1Q3ZLR7 823 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ZACNQ401N2 412 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 LIN9Q5TKA1 542 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 SWSAP1Q6NVH7 229 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 AADACL2Q6P093 401 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 TTC27Q6P3X3 843 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ABHD15Q6UXT9 468 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 C15orf39Q6ZRI6 1047 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 CEP128Q6ZU80 1094 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 TRMT10CQ7L0Y3 403 aaKnown RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ADAT2Q7Z6V5 191 aaKnown RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 APOBEC3FQ8IUX4 373 aaKnown RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 CCDC105Q8IYK2 499 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 MCOLN2Q8IZK6 566 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 OTUD6BQ8N6M0 293 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 FBXO25Q8TCJ0 367 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 PSPC1Q8WXF1 523 aaKnown RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 P3H4Q92791 437 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 GLG1Q92896 1179 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ART4Q93070 314 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 C18orf8Q96DM3 657 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 VCPIP1Q96JH7 1222 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 FNBP1Q96RU3 617 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 CORO1BQ9BR76 489 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 SH2D3AQ9BRG2 576 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 KIFC3Q9BVG8 833 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 TEX13BQ9BXU2 312 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 OSBPL7Q9BZF2 842 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ROPN1BQ9BZX4 212 aaPredicted RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 EPB41L4BQ9H329 900 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ACAD9Q9H845 621 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ROPN1Q9HAT0 212 aaPredicted RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 NPHS2Q9NP85 383 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 XPNPEP1Q9NQW7 623 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 TOPORSQ9NS56 1045 aaPredicted RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 HOMER3Q9NSC5 361 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 WHRNQ9P202 907 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 GGT7Q9UJ14 662 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ANAPC7Q9UJX3 599 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF214Q9UL59 606 aaPredicted RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ADAMTS5Q9UNA0 930 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 PTPN22Q9Y2R2 807 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 PCDHB2Q9Y5E7 798 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 STYXL1Q9Y6J8 313 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ADGRA3Q8IWK6 1321 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 NDC80O14777 642 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 RGS16O15492 202 aaPredicted RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 TRAPPC3O43617 180 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CAND2O75155 1236 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 PROSCO94903 275 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 FSBPO95073 299 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 GAS8O95995 478 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CYP1A1P04798 512 aaPredicted RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 USP17L7P0C7H9 530 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 FAM87AP0C7U9 286 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 TNNI1P19237 187 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 ITIH2P19823 946 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 ATP5DP30049 168 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CETN2P41208 172 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 MMP13P45452 471 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 NSFP46459 744 aaKnown RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 GMPSP49915 693 aaPredicted RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 AP3M2P53677 418 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 POLGP54098 1239 aaPredicted RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 RACK1P63244 317 aaKnown RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 PCDH1Q08174 1060 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CUL2Q13617 745 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 PTK6Q13882 451 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 PLCB4Q15147 1175 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 PPP1R7Q15435 360 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 SURF1Q15526 300 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 STXBP2Q15833 593 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 SKIDA1Q1XH10 827 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 MTERF2Q49AM1 385 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 TBC1D10BQ4KMP7 808 aaPredicted RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 NOL9Q5SY16 702 aaKnown RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 ERMARDQ5T6L9 678 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 NBPF12Q5TAG4 269 aaPredicted RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 ANGEL2Q5VTE6 544 aaKnown RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 MFSD5Q6N075 450 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 C6orf89Q6UWU4 347 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CATSPERGQ6ZRH7 1159 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 TAOK1Q7L7X3 1001 aa5.22□□□□□ -1.57
SF3B6-202ENST00000478050 CCDC60Q8IWA6 550 aaPredicted RBP5.22□□□□□ -1.57
SF3B6-202ENST00000478050 ZDHHC14Q8IZN3 488 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms