RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 UBA3Q8TBC4 463 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 SLC35F5Q8WV83 523 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 CDK5RAP1Q96SZ6 601 aaKnown RBP14.14□□□□□ -0.15
ACTN4-205ENST00000477174 ZSWIM1Q9BR11 485 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 NAT10Q9H0A0 1025 aaKnown RBP14.14□□□□□ -0.15
ACTN4-205ENST00000477174 LINC00597Q9H2U6 94 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 LRRC4Q9HBW1 653 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 SMPD4Q9NXE4 827 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 CFAP97Q9P2B7 532 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 TBC1D14Q9P2M4 693 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.14□□□□□ -0.15
ACTN4-205ENST00000477174 A0A1W2PQH9 124 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 LRRC10BA6NIK2 292 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 MED7O43513 233 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 LETM1O95202 739 aaPredicted RBP14.13□□□□□ -0.15
ACTN4-205ENST00000477174 ZBED1O96006 694 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 TPM2P07951 284 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 RALAP11233 206 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 RARGP13631 454 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 PTMSP20962 102 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 IFNAR2P48551 515 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 TKTL1P51854 596 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 MYL5Q02045 173 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 TYRO3Q06418 890 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 TCF15Q12870 199 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 MEA1Q16626 185 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 EML3Q32P44 896 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 TRIM68Q6AZZ1 485 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 CAVIN1Q6NZI2 390 aaKnown RBP14.13□□□□□ -0.15
ACTN4-205ENST00000477174 GJB7Q6PEY0 223 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 MAMSTRQ6ZN01 415 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 C11orf57Q6ZUT1 292 aaPredicted RBP14.13□□□□□ -0.15
ACTN4-205ENST00000477174 SCD5Q86SK9 330 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 ADGRG2Q8IZP9 1017 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 SCML4Q8N228 414 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 CPA6Q8N4T0 437 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 TTC16Q8NEE8 873 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 PRSS33Q8NF86 280 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 TTC8Q8TAM2 541 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 SHC3Q92529 594 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 EXOC4Q96A65 974 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 HSFY1Q96LI6 401 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 ECT2Q9H8V3 914 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 NMUR1Q9HB89 426 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.13□□□□□ -0.15
ACTN4-205ENST00000477174 OSER1Q9NX31 292 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 NAGPAQ9UK23 515 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 WNT6Q9Y6F9 365 aa14.13□□□□□ -0.15
ACTN4-205ENST00000477174 DENND4CQ5VZ89 1909 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 OTOL1A6NHN0 477 aaPredicted RBP14.12□□□□□ -0.15
ACTN4-205ENST00000477174 PES1O00541 588 aaKnown RBP14.12□□□□□ -0.15
ACTN4-205ENST00000477174 TRDMT1O14717 391 aaKnown RBP14.12□□□□□ -0.15
ACTN4-205ENST00000477174 NFATC1O95644 943 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 TBX18O95935 607 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 ARSAP15289 507 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 BRD2P25440 801 aaKnown RBP14.12□□□□□ -0.15
ACTN4-205ENST00000477174 SOX9P48436 509 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 KLHL40Q2TBA0 621 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 DGKKQ5KSL6 1271 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 PMF1Q6P1K2 205 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 C1orf210Q8IVY1 113 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 ANKRD20A12PQ8NF67 263 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 STK32AQ8WU08 396 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 ZNF606Q8WXB4 792 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 OTUB2Q96DC9 234 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 ZFRQ96KR1 1074 aaKnown RBP14.12□□□□□ -0.15
ACTN4-205ENST00000477174 IER2Q9BTL4 223 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 KLF16Q9BXK1 252 aaPredicted RBP14.12□□□□□ -0.15
ACTN4-205ENST00000477174 LMAN1LQ9HAT1 526 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 SIX2Q9NPC8 291 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 CNGB3Q9NQW8 809 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 DNMT3LQ9UJW3 386 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 DNAJC12Q9UKB3 198 aa14.12□□□□□ -0.15
ACTN4-205ENST00000477174 NDRG2Q9UN36 371 aaKnown RBP14.12□□□□□ -0.15
ACTN4-205ENST00000477174 BECN2A8MW95 431 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 M0QYV0 167 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 TULP2O00295 520 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 CHRNB1P11230 501 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 GJA4P35212 333 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 USP8P40818 1118 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 YWHAGP61981 247 aaKnown RBP eCLIP14.11□□□□□ -0.15
ACTN4-205ENST00000477174 APBA1Q02410 837 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 PTK2Q05397 1052 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 GOLGA8FQ08AF8 430 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 GOLGA8DPQ0D2H9 430 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 KCNMA1Q12791 1236 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 LRRC32Q14392 662 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 KRT31Q15323 416 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 ARHGAP44Q17R89 818 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 C10orf120Q5SQS8 335 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 KLHDC7AQ5VTJ3 777 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 DPY19L2P1Q6NXN4 242 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 TXNDC11Q6PKC3 985 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 HTR3DQ70Z44 454 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 SIX6OS1Q8N1H7 587 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 SYNPOQ8N3V7 929 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 NUP210Q8TEM1 1887 aaPredicted RBP14.11□□□□□ -0.15
ACTN4-205ENST00000477174 SECISBP2LQ93073 1101 aaKnown RBP14.11□□□□□ -0.15
ACTN4-205ENST00000477174 BPIFA3Q9BQP9 254 aa14.11□□□□□ -0.15
ACTN4-205ENST00000477174 ULBP1Q9BZM6 244 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms