RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 RALAP11233 206 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 MATKP42679 507 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 SLC7A5Q01650 507 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 CCDC142Q17RM4 750 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 CCDC14Q49A88 953 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 CTXN3Q4LDR2 81 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 TFDP3Q5H9I0 405 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 VARS2Q5ST30 1063 aaKnown RBP12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 STRADAQ7RTN6 431 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 SCML4Q8N228 414 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 CLEC4CQ8WTT0 213 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 FAM172AQ8WUF8 416 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 IRGQQ8WZA9 623 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 RNF25Q96BH1 459 aaPredicted RBP12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 FUBP3Q96I24 572 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 CFAP57Q96MR6 1250 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 SMOQ99835 787 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 PCYOX1Q9UHG3 505 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 EFR3BQ9Y2G0 817 aa12.96□□□□□ -0.33
CDKAL1-203ENST00000476517 TRIM66O15016 1216 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 DGKIO75912 1065 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 BEST1O76090 585 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 UPP2O95045 317 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 GALTP07902 379 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 RARAP10276 462 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 TCF4P15884 667 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 FGFR3P22607 806 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 BDNFP23560 247 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 GBP1P32455 592 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 NOS2P35228 1153 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 ALDH7A1P49419 539 aaKnown RBP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 SULT1E1P49888 294 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 EPHB4P54760 987 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 BCAR1P56945 870 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 DAOAP59103 153 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 YWHAZP63104 245 aaKnown RBP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 ATP11AP98196 1134 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 GUCY2DQ02846 1103 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 ADCY1Q08828 1119 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 SMARCB1Q12824 385 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 CUL1Q13616 776 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 KRT81Q14533 505 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 PDK2Q15119 407 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 C15orf59Q2T9L4 293 aaPredicted RBP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 SMTNL2Q2TAL5 461 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 SLC39A12Q504Y0 691 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 BOLA3Q53S33 107 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 RAB41Q5JT25 222 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 MFSD5Q6N075 450 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 TRNP1Q6NT89 227 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 CCDC137Q6PK04 289 aaKnown RBP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 ANKS3Q6ZW76 656 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 CEP57Q86XR8 500 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 MAP7D3Q8IWC1 876 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 CCDC105Q8IYK2 499 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 PRELID2Q8N945 189 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 EIF1ADQ8N9N8 165 aaKnown RBP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 KCTD6Q8NC69 237 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 HSPH1Q92598 858 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 DDX23Q9BUQ8 820 aaKnown RBP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 FRMD8P1Q9BZ68 369 aaPredicted RBP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 ULBP1Q9BZM6 244 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 LRRC19Q9H756 370 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 POPDC2Q9HBU9 364 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 GDF3Q9NR23 364 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 RRN3Q9NYV6 651 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 PRKAG2Q9UGJ0 569 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 PCSK1NQ9UHG2 260 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 AMACRQ9UHK6 382 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 FEZ2Q9UHY8 353 aaPredicted RBP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 DMGDHQ9UI17 866 aaKnown RBP12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 PCDHB5Q9Y5E4 795 aa12.95□□□□□ -0.34
CDKAL1-203ENST00000476517 hCG_1818297A0A087WSY0 165 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 PI4K2BG5E9Z4 385 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 CAPN9O14815 690 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 MDM4O15151 490 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 TTI1O43156 1089 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 ATP8B1O43520 1251 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 ECEL1O95672 775 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 GAS8O95995 478 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 CPB1P15086 417 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 KDELR1P24390 212 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 COILP38432 576 aaPredicted RBP12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 CDKN2BP42772 138 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 LMNB2Q03252 620 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 KLF1Q13351 362 aaPredicted RBP12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 SIX1Q15475 284 aaPredicted RBP12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 SLC25A52Q3SY17 297 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 SPOUT1Q5T280 376 aaKnown RBP12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 SCYL2Q6P3W7 929 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 VSTM1Q6UX27 236 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 MFSD7Q6UXD7 560 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 SYDE1Q6ZW31 735 aaPredicted RBP12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 VSIG1Q86XK7 387 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 CMTR2Q8IYT2 770 aaKnown RBP12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 DEFB106AQ8N104 65 aa12.94□□□□□ -0.34
CDKAL1-203ENST00000476517 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms