RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 ZNF844Q08AG5 666 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 ARHGEF7Q14155 803 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 EIF4A2Q14240 407 aaKnown RBP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 IQCB1Q15051 598 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 INSCQ1MX18 579 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 SLC5A9Q2M3M2 681 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 METTL24Q5JXM2 366 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 CACHD1Q5VU97 1274 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 PLAG1Q6DJT9 500 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 MRNIPQ6NTE8 343 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 TAPT1Q6NXT6 567 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 SLC22A25Q6T423 547 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 LAYNQ6UX15 382 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 ATF7IPQ6VMQ6 1270 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 KIAA0408Q6ZU52 694 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 BBS12Q6ZW61 710 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 TMTC3Q6ZXV5 915 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 GAS2L3Q86XJ1 694 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 VSIG1Q86XK7 387 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 KRT73Q86Y46 540 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 SP8Q8IXZ3 490 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 CFAP52Q8N1V2 620 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 TBC1D22AQ8WUA7 517 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 ATRIPQ8WXE1 791 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 ATP2A3Q93084 1043 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 SDCCAG3Q96C92 435 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 VMP1Q96GC9 406 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 CALML4Q96GE6 196 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 MARS2Q96GW9 593 aaKnown RBP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 CNDP2Q96KP4 475 aaKnown RBP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 SPATA17Q96L03 361 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 TRIB1Q96RU8 372 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 REEP2Q9BRK0 252 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 MXD3Q9BW11 206 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 SIL1Q9H173 461 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 ABHD16BQ9H3Z7 469 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 SYNCQ9H7C4 482 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 PLSCR4Q9NRQ2 329 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 ETAA1Q9NY74 926 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 PCDHGB4Q9UN71 923 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 C19orf53Q9UNZ5 99 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 SHOC2Q9UQ13 582 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 ATP11BQ9Y2G3 1177 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 CYP46A1Q9Y6A2 500 aa4.64□□□□□ -1.67
VPS13D-207ENST00000476169 TDRD9Q8NDG6 1382 aaKnown RBP4.64□□□□□ -1.67
VPS13D-207ENST00000476169 CCDC78A2IDD5 438 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 SMTNL1A8MU46 457 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 STX16-NPEPL1H3BU86 382 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 STX16O14662 325 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 DCLK1O15075 740 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 KLK10O43240 276 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 CCP110O43303 1012 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 CCNT2O60583 730 aaKnown RBP4.63□□□□□ -1.67
VPS13D-207ENST00000476169 TSPAN3O60637 253 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 RAD17O75943 681 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 TMEM63AO94886 807 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 CLTBP09497 229 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 ATXN1LP0C7T5 689 aaKnown RBP4.63□□□□□ -1.67
VPS13D-207ENST00000476169 PORP16435 677 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-207ENST00000476169 YY1P25490 414 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 HOXD13P35453 343 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 GGT5P36269 586 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 PTDSS1P48651 473 aaKnown RBP4.63□□□□□ -1.67
VPS13D-207ENST00000476169 RPP30P78346 268 aaKnown RBP4.63□□□□□ -1.67
VPS13D-207ENST00000476169 LRMPQ12912 555 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 FOXL1Q12952 345 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 CDC16Q13042 620 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 CHAF1BQ13112 559 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 MPP3Q13368 585 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 KCNAB1Q14722 419 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 TRIM71Q2Q1W2 868 aaKnown RBP4.63□□□□□ -1.67
VPS13D-207ENST00000476169 MGAT5BQ3V5L5 792 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 DCAF17Q5H9S7 520 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-207ENST00000476169 FAM69AQ5T7M9 428 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 OGFOD2Q6N063 350 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 KLHL24Q6TFL4 600 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 SLC30A10Q6XR72 485 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 SYNE3Q6ZMZ3 975 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 TTC30AQ86WT1 665 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 SYT12Q8IV01 421 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 POU5F2Q8N7G0 328 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 SYT8Q8NBV8 401 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 PSD4Q8NDX1 1056 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 NSUN7Q8NE18 718 aaKnown RBP4.63□□□□□ -1.67
VPS13D-207ENST00000476169 CPT1BQ92523 772 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 PNKPQ96T60 521 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 MESP1Q9BRJ9 268 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 TXLNGYQ9BZA5 131 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 ARHGAP39Q9C0H5 1083 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 RNPEPQ9H4A4 650 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 XPNPEP3Q9NQH7 507 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 PI4KBQ9UBF8 816 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 KCND3Q9UK17 655 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 HSF4Q9ULV5 492 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 CA14Q9ULX7 337 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 DAPP1Q9UN19 280 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 TMEM5Q9Y2B1 443 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 DTNAQ9Y4J8 743 aa4.63□□□□□ -1.67
VPS13D-207ENST00000476169 RNF114Q9Y508 228 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms