RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 C7orf31Q8N865 590 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 C2orf69Q8N8R5 385 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 GDAP1Q8TB36 358 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 THOC1Q96FV9 657 aaKnown RBP16.68■□□□□ 0.26
VARS2-207ENST00000476162 B3GNT5Q9BYG0 378 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 NGRNQ9NPE2 291 aaKnown RBP16.68■□□□□ 0.26
VARS2-207ENST00000476162 SLC5A4Q9NY91 659 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 KLK14Q9P0G3 267 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 CNTN3Q9P232 1028 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 HESX1Q9UBX0 185 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 ACTL7BQ9Y614 415 aa16.68■□□□□ 0.26
VARS2-207ENST00000476162 ENO4A6NNW6 628 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 TCP11X1B4DZS4 312 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 PAPSS1O43252 624 aaPredicted RBP16.67■□□□□ 0.26
VARS2-207ENST00000476162 SMNDC1O75940 238 aaKnown RBP eCLIP16.67■□□□□ 0.26
VARS2-207ENST00000476162 SLC6A3Q01959 620 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 MTM1Q13496 603 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 MFSD10Q14728 455 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 MSS51Q4VC12 460 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 TLK2Q86UE8 772 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 P3H4Q92791 437 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 STAMBPL1Q96FJ0 436 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 GPATCH2LQ9NWQ4 482 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 FLRT1Q9NZU1 646 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 SAMD15Q9P1V8 674 aa16.67■□□□□ 0.26
VARS2-207ENST00000476162 A8MXQ7 604 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 RAB27AP51159 221 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 ARL4CP56559 192 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 GPX6P59796 221 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 ZNF200P98182 395 aaPredicted RBP16.66■□□□□ 0.26
VARS2-207ENST00000476162 KRT81Q14533 505 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 NOMO1Q15155 1222 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 SLC5A9Q2M3M2 681 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 DARS2Q6PI48 645 aaKnown RBP16.66■□□□□ 0.26
VARS2-207ENST00000476162 TDRPQ86YL5 185 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 ANKS4BQ8N8V4 417 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 FAM172AQ8WUF8 416 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 MRRFQ96E11 262 aaKnown RBP16.66■□□□□ 0.26
VARS2-207ENST00000476162 RNF157Q96PX1 679 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 PIN4Q9Y237 131 aaKnown RBP16.66■□□□□ 0.26
VARS2-207ENST00000476162 C15orf41Q9Y2V0 281 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 DPYSL4O14531 572 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 TREHO43280 583 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 CLUHO75153 1309 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 TMEM63AO94886 807 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 PDGFRBP09619 1106 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 SETSIPP0DME0 302 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 IL4RP24394 825 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 SDC4P31431 198 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 BASP1P80723 227 aaKnown RBP16.66■□□□□ 0.26
VARS2-207ENST00000476162 ROR1Q01973 937 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 FAM182AQ5T1J6 154 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 C1orf228Q6PIY5 440 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 TRABD2AQ86V40 505 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 UNC93AQ86WB7 457 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 PYROXD1Q8WU10 500 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 CKAP2Q8WWK9 683 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 CCT6BQ92526 530 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 TBC1D31Q96DN5 1066 aa16.66■□□□□ 0.26
VARS2-207ENST00000476162 NSRP1Q9H0G5 558 aaKnown RBP16.66■□□□□ 0.26
VARS2-207ENST00000476162 UBQLN1Q9UMX0 589 aaKnown RBP16.66■□□□□ 0.26
VARS2-207ENST00000476162 SMIM28A0A1B0GU29 152 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 SSTR1P30872 391 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 STX2P32856 288 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 ADAM17P78536 824 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 MAP2K5Q13163 448 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 TFDP2Q14188 446 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 SNX17Q15036 470 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 PCBP1Q15365 356 aaKnown RBP eCLIP16.65■□□□□ 0.26
VARS2-207ENST00000476162 PKN2Q16513 984 aaKnown RBP16.65■□□□□ 0.26
VARS2-207ENST00000476162 BOLA3Q53S33 107 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 FAM47CQ5HY64 1035 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 FBXO47Q5MNV8 452 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 MORN1Q5T089 497 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 ARHGEF18Q6ZSZ5 1173 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 SESTD1Q86VW0 696 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 MAP7D3Q8IWC1 876 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.65■□□□□ 0.26
VARS2-207ENST00000476162 WDR83Q9BRX9 315 aaKnown RBP16.65■□□□□ 0.26
VARS2-207ENST00000476162 RNF39Q9H2S5 420 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 FGFR1OP2Q9NVK5 253 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 NKIRAS1Q9NYS0 192 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 XPO7Q9UIA9 1087 aaKnown RBP16.65■□□□□ 0.26
VARS2-207ENST00000476162 PIRO00625 290 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 SPTLC1O15269 473 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 ZNF865P0CJ78 1059 aaPredicted RBP16.65■□□□□ 0.26
VARS2-207ENST00000476162 GHRP10912 638 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 FGFR1P11362 822 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 CCDC130P13994 396 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 LMO2P25791 158 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 STIP1P31948 543 aaKnown RBP16.65■□□□□ 0.26
VARS2-207ENST00000476162 NUGGCQ68CJ6 796 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 ARHGAP17Q68EM7 881 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 KBTBD7Q8WVZ9 684 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 ADAM33Q9BZ11 813 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 UBN1Q9NPG3 1134 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 IRAK4Q9NWZ3 460 aa16.65■□□□□ 0.26
VARS2-207ENST00000476162 H7C0C1 242 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 ATP2C2O75185 946 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 SPAG7O75391 227 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms