RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 KLHDC7AQ5VTJ3 777 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 KIRREL2Q6UWL6 708 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 BEND5Q7L4P6 421 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 KRT28Q7Z3Y7 464 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 LIX1LQ8IVB5 337 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 VGLL2Q8N8G2 317 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 C11orf44Q8N8P7 122 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 PNLDC1Q8NA58 520 aaKnown RBP7.62□□□□□ -1.19
SMC5-203ENST00000475540 NAA15Q9BXJ9 866 aaKnown RBP7.62□□□□□ -1.19
SMC5-203ENST00000475540 STEAP1Q9UHE8 339 aa7.62□□□□□ -1.19
SMC5-203ENST00000475540 WIPF3A6NGB9 483 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 PRRT4C9JH25 899 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 POC1B-GALNT4F8VUJ3 575 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 UBE2Q2LH0YL09 131 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 AGPSO00116 658 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 PRC1O43663 620 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 NHLRC4P0CG21 123 aaPredicted RBP7.61□□□□□ -1.19
SMC5-203ENST00000475540 NTSR1P30989 418 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 ALDH5A1P51649 535 aaPredicted RBP7.61□□□□□ -1.19
SMC5-203ENST00000475540 PSG6Q00889 435 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 TMEM63BQ5T3F8 832 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 CLEC9AQ6UXN8 241 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 ZNF782Q6ZMW2 699 aaPredicted RBP7.61□□□□□ -1.19
SMC5-203ENST00000475540 CHSY1Q86X52 802 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 SRRM1Q8IYB3 904 aaKnown RBP7.61□□□□□ -1.19
SMC5-203ENST00000475540 GALNT4Q8N4A0 578 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 CCDC150Q8NCX0 1101 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 LRRC46Q96FV0 321 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 ZDHHC12Q96GR4 267 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 CCDC17Q96LX7 622 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 FAM227BQ96M60 508 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 FLRT1Q9NZU1 646 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 LPAR3Q9UBY5 353 aa7.61□□□□□ -1.19
SMC5-203ENST00000475540 ANO9A1A5B4 782 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 TISP43B9A030 160 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 SPRY2O43597 315 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 TMPRSS11DO60235 418 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 FGFR2P21802 821 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 RENBPP51606 427 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 CERKLQ49MI3 558 aaPredicted RBP7.6□□□□□ -1.19
SMC5-203ENST00000475540 CATSPERGQ6ZRH7 1159 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 ADAMTS18Q8TE60 1221 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 DDB2Q92466 427 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 VPS50Q96JG6 964 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 ZC3H10Q96K80 434 aaKnown RBP7.6□□□□□ -1.19
SMC5-203ENST00000475540 ASB2Q96Q27 587 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 FYTTD1Q96QD9 318 aaKnown RBP7.6□□□□□ -1.19
SMC5-203ENST00000475540 MMS19Q96T76 1030 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 COLEC11Q9BWP8 271 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 STARD7Q9NQZ5 370 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 RIMKLBQ9ULI2 386 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 PCSK5Q92824 1860 aa7.6□□□□□ -1.19
SMC5-203ENST00000475540 CLCA1A8K7I4 914 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 A8MVJ9 347 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 APOL1O14791 398 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 MYL1P05976 194 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 MYL3P08590 195 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 HMGB1P09429 215 aaKnown RBP7.59□□□□□ -1.19
SMC5-203ENST00000475540 TSHRP16473 764 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 CERS1P27544 350 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 COPB1P53618 953 aaKnown RBP7.59□□□□□ -1.19
SMC5-203ENST00000475540 LMAN2Q12907 356 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 FOXF2Q12947 444 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 ST3GAL2Q16842 350 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 C4orf46Q504U0 113 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 USP49Q70CQ1 688 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 DPP9Q86TI2 863 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 FSTL5Q8N475 847 aaPredicted RBP7.59□□□□□ -1.19
SMC5-203ENST00000475540 RNF152Q8N8N0 203 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 MAGEB5Q9BZ81 275 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 SEMA4CQ9C0C4 833 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 SLC25A32Q9H2D1 315 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 MYO1AQ9UBC5 1043 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 SLC27A6Q9Y2P4 619 aa7.59□□□□□ -1.19
SMC5-203ENST00000475540 COQ9O75208 318 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 GCATO75600 419 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 MT-CO3P00414 261 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 CHRM5P08912 532 aaPredicted RBP7.58□□□□□ -1.2
SMC5-203ENST00000475540 CYP2D6P10635 497 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 RBL1P28749 1068 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 ATICP31939 592 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 DIO1P49895 249 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 CLCA4Q14CN2 919 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 BCDIN3DQ7Z5W3 292 aaKnown RBP7.58□□□□□ -1.2
SMC5-203ENST00000475540 METTL25Q8N6Q8 603 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 ZBTB26Q9HCK0 441 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 TMOD4Q9NZQ9 345 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 VPS51Q9UID3 782 aa7.58□□□□□ -1.2
SMC5-203ENST00000475540 CGB1A6NKQ9 187 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 BTBD19C9JJ37 291 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 CELA2AP08217 269 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 MYL4P12829 197 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 ABCG1P45844 678 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 COPAP53621 1224 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 EIF4A1P60842 406 aaKnown RBP7.57□□□□□ -1.2
SMC5-203ENST00000475540 SRSF7Q16629 238 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMC5-203ENST00000475540 FAM187BQ17R55 369 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 ARL13BQ3SXY8 428 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 CCDC181Q5TID7 509 aa7.57□□□□□ -1.2
SMC5-203ENST00000475540 WDYHV1Q96HA8 205 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms