RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 COL20A1Q9P218 1284 aa5.56□□□□□ -1.52
LTN1-204ENST00000475344 FRMPD2Q68DX3 1309 aaPredicted RBP5.55□□□□□ -1.52
LTN1-204ENST00000475344 GOLGA6CA6NDK9 693 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 GOLGA6BA6NDN3 693 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 SPRY2O43597 315 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 RNF8O76064 485 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 TOP3BO95985 862 aaKnown RBP5.55□□□□□ -1.52
LTN1-204ENST00000475344 MT-CO3P00414 261 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 GOLGA6DP0CG33 693 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 PHKG2P15735 406 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 PEX2P28328 305 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 DAZAP2Q15038 168 aaPredicted RBP5.55□□□□□ -1.52
LTN1-204ENST00000475344 ZNF750Q32MQ0 723 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 MAFAQ8NHW3 353 aaPredicted RBP5.55□□□□□ -1.52
LTN1-204ENST00000475344 APIPQ96GX9 242 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 ZNF48Q96MX3 618 aaPredicted RBP5.55□□□□□ -1.52
LTN1-204ENST00000475344 CHST8Q9H2A9 424 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 GOLGA6AQ9NYA3 693 aa5.55□□□□□ -1.52
LTN1-204ENST00000475344 SCAF8Q9UPN6 1271 aaKnown RBP5.55□□□□□ -1.52
LTN1-204ENST00000475344 CYP2D7A0A087X1C5 515 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 BTBD19C9JJ37 291 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 AGPSO00116 658 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 GOLIM4O00461 696 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 PPEF2O14830 753 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 MOSPD3O75425 235 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 BCAR3O75815 825 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 IGKV2-30P06310 120 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 PARP1P09874 1014 aaKnown RBP5.54□□□□□ -1.52
LTN1-204ENST00000475344 TXNP10599 105 aaKnown RBP5.54□□□□□ -1.52
LTN1-204ENST00000475344 NTSR1P30989 418 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 CARSP49589 748 aaKnown RBP5.54□□□□□ -1.52
LTN1-204ENST00000475344 PLCD1P51178 756 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 KCNAB1Q14722 419 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 NPY5RQ15761 445 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 GFOD2Q3B7J2 385 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 PXDC1Q5TGL8 231 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 UNC13DQ70J99 1090 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 SRGAP1Q7Z6B7 1085 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 C14orf80Q86SX3 495 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 WDR75Q8IWA0 830 aaKnown RBP5.54□□□□□ -1.52
LTN1-204ENST00000475344 OSR1Q8TAX0 266 aaPredicted RBP5.54□□□□□ -1.52
LTN1-204ENST00000475344 ZBTB9Q96C00 473 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 APOL5Q9BWW9 433 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 TBC1D23Q9NUY8 699 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 TUBA8Q9NY65 449 aaPredicted RBP5.54□□□□□ -1.52
LTN1-204ENST00000475344 PCDHGB6Q9Y5F9 930 aa5.54□□□□□ -1.52
LTN1-204ENST00000475344 ADAM10O14672 748 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 TMPRSS11DO60235 418 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 ZBED1O96006 694 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 APEHP13798 732 aaKnown RBP5.53□□□□□ -1.52
LTN1-204ENST00000475344 IL1R1P14778 569 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 ATP5F1P24539 256 aaPredicted RBP5.53□□□□□ -1.52
LTN1-204ENST00000475344 FAM193AP78312 1265 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 TIAL1Q01085 375 aaKnown RBP eCLIP5.53□□□□□ -1.52
LTN1-204ENST00000475344 TRIP6Q15654 476 aaKnown RBP5.53□□□□□ -1.52
LTN1-204ENST00000475344 CC2D1BQ5T0F9 858 aaKnown RBP5.53□□□□□ -1.52
LTN1-204ENST00000475344 ZNF813Q6ZN06 617 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 DCDC5Q6ZRR9 648 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 C16orf71Q8IYS4 520 aaPredicted RBP5.53□□□□□ -1.52
LTN1-204ENST00000475344 NANOGP1Q8N7R0 232 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 IPCEF1Q8WWN9 437 aaPredicted RBP5.53□□□□□ -1.52
LTN1-204ENST00000475344 CTHRC1Q96CG8 243 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 WDYHV1Q96HA8 205 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 HIST1H2AAQ96QV6 131 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 USP29Q9HBJ7 922 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 NKX1-2Q9UD57 310 aaPredicted RBP5.53□□□□□ -1.52
LTN1-204ENST00000475344 ZNF212Q9UDV6 495 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 ASAP1Q9ULH1 1129 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 SNX13Q9Y5W8 968 aa5.53□□□□□ -1.52
LTN1-204ENST00000475344 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.52□□□□□ -1.53
LTN1-204ENST00000475344 AQP7P3A6NL99 342 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 M0R3H8 397 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 FCHO1O14526 889 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 SNX2O60749 519 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 GHRHRQ02643 423 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 DEUP1Q05D60 604 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 KCNB1Q14721 858 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 SHC4Q6S5L8 630 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 CLEC9AQ6UXN8 241 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 METTL25Q8N6Q8 603 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 NGDNQ8NEJ9 315 aaKnown RBP5.52□□□□□ -1.53
LTN1-204ENST00000475344 CUL5Q93034 780 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 DHX36Q9H2U1 1008 aaKnown RBP5.52□□□□□ -1.53
LTN1-204ENST00000475344 RIMKLBQ9ULI2 386 aa5.52□□□□□ -1.53
LTN1-204ENST00000475344 CACNA1IQ9P0X4 2223 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 E5RJQ4 531 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 INMTO95050 263 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 A1BGP04217 495 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 CD19P15391 556 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 ATF3P18847 181 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 BTF3P20290 206 aaKnown RBP5.51□□□□□ -1.53
LTN1-204ENST00000475344 MCM5P33992 734 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 MFSD13AQ14CX5 517 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 LARS2Q15031 903 aaKnown RBP5.51□□□□□ -1.53
LTN1-204ENST00000475344 C4orf46Q504U0 113 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 PLAG1Q6DJT9 500 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 VSTM1Q6UX27 236 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 RANBP10Q6VN20 620 aa5.51□□□□□ -1.53
LTN1-204ENST00000475344 CHST15Q7LFX5 561 aaPredicted RBP5.51□□□□□ -1.53
LTN1-204ENST00000475344 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms