RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 LEFTY2O00292 366 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 THAP12O43422 761 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 MED7O43513 233 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 TLR5O60602 858 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 GABBR2O75899 941 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 MBL2P11226 248 aaPredicted RBP17.07■□□□□ 0.32
SRM-204ENST00000475189 RFX1P22670 979 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 GPD2P43304 727 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 RGS7P49802 495 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 PLCB2Q00722 1185 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 UBXN1Q04323 297 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 PRKCQQ04759 706 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 RAPGEF1Q13905 1077 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 MTF1Q14872 753 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 MEA1Q16626 185 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 CWF19L1Q69YN2 538 aaKnown RBP17.07■□□□□ 0.32
SRM-204ENST00000475189 PM20D1Q6GTS8 502 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 DENND1BQ6P3S1 775 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 FAM71AQ8IYT1 594 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 TTC16Q8NEE8 873 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 FLCNQ8NFG4 579 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 ULBP1Q9BZM6 244 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 TBC1D17Q9HA65 648 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 LRRC4Q9HBW1 653 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 CYLDQ9NQC7 956 aa17.07■□□□□ 0.32
SRM-204ENST00000475189 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.07■□□□□ 0.32
SRM-204ENST00000475189 MYOFQ9NZM1 2061 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 SHISA7A6NL88 538 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 EPHB6O15197 1021 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 TBX18O95935 607 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 ZBED1O96006 694 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 RARGP13631 454 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 PSEN1P49768 467 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 PTK2Q05397 1052 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 TNK2Q07912 1038 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 ADIGQ0VDE8 80 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 SYCP1Q15431 976 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 TPRG1Q6ZUI0 275 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 BHLHA9Q7RTU4 235 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 SUGP1Q8IWZ8 645 aaKnown RBP17.06■□□□□ 0.32
SRM-204ENST00000475189 ZNF276Q8N554 614 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 CSGALNACT1Q8TDX6 532 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 NDRG1Q92597 394 aaKnown RBP17.06■□□□□ 0.32
SRM-204ENST00000475189 SHDQ96IW2 340 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 ZFRQ96KR1 1074 aaKnown RBP17.06■□□□□ 0.32
SRM-204ENST00000475189 HSFY1Q96LI6 401 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 ERGIC2Q96RQ1 377 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 DDX23Q9BUQ8 820 aaKnown RBP17.06■□□□□ 0.32
SRM-204ENST00000475189 STK33Q9BYT3 514 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 HPS4Q9NQG7 708 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 FAM207AQ9NSI2 230 aaPredicted RBP17.06■□□□□ 0.32
SRM-204ENST00000475189 SMPD4Q9NXE4 827 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 NAGPAQ9UK23 515 aa17.06■□□□□ 0.32
SRM-204ENST00000475189 STK25O00506 426 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 TEX33O43247 280 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 CAVIN2O95810 425 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 LCP1P13796 627 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 ATP5C1P36542 298 aaKnown RBP17.05■□□□□ 0.32
SRM-204ENST00000475189 RPL34P49207 117 aaKnown RBP17.05■□□□□ 0.32
SRM-204ENST00000475189 CLCN5P51795 746 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 VCPP55072 806 aaKnown RBP17.05■□□□□ 0.32
SRM-204ENST00000475189 POLR2FP61218 127 aaKnown RBP17.05■□□□□ 0.32
SRM-204ENST00000475189 TRIM68Q6AZZ1 485 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 ASTLQ6HA08 431 aaPredicted RBP17.05■□□□□ 0.32
SRM-204ENST00000475189 CC2D1AQ6P1N0 951 aaPredicted RBP17.05■□□□□ 0.32
SRM-204ENST00000475189 LUZP1Q86V48 1076 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 SLC47A2Q86VL8 602 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 SCML4Q8N228 414 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 TTC8Q8TAM2 541 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 OSCP1Q8WVF1 389 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 GTSE1Q9NYZ3 720 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 CLIC5Q9NZA1 410 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 CYTH4Q9UIA0 394 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 NUDT5Q9UKK9 219 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 PIAS3Q9Y6X2 628 aa17.05■□□□□ 0.32
SRM-204ENST00000475189 KANSL1LA0AUZ9 987 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 F8VZ95 297 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 PIK3R2O00459 728 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 PI15O43692 258 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 GLULP15104 373 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 ARSAP15289 507 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 AOC1P19801 751 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 CD72P21854 359 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 AVPR2P30518 371 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 MLLT6P55198 1093 aaPredicted RBP17.04■□□□□ 0.32
SRM-204ENST00000475189 BPIFB4P59827 614 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 YWHAGP61981 247 aaKnown RBP eCLIP17.04■□□□□ 0.32
SRM-204ENST00000475189 PDGFRLQ15198 375 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 KLHDC10Q6PID8 442 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 DDX42Q86XP3 938 aaKnown RBP eCLIP17.04■□□□□ 0.32
SRM-204ENST00000475189 SIX6OS1Q8N1H7 587 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 ARHGAP18Q8N392 663 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 PCMTD1Q96MG8 357 aaPredicted RBP17.04■□□□□ 0.32
SRM-204ENST00000475189 KLF16Q9BXK1 252 aaPredicted RBP17.04■□□□□ 0.32
SRM-204ENST00000475189 FOXQ1Q9C009 403 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 NACA2Q9H009 215 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 LINC00597Q9H2U6 94 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 EBF3Q9H4W6 596 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 CNGB3Q9NQW8 809 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 DUS2Q9NX74 493 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms