RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 XRCC4Q13426 336 aa22.7■■□□□ 1.22
CCM2-206ENST00000474617 WSCD1Q658N2 575 aa22.7■■□□□ 1.22
CCM2-206ENST00000474617 AGMOQ6ZNB7 445 aa22.7■■□□□ 1.22
CCM2-206ENST00000474617 WNT8BQ93098 351 aa22.7■■□□□ 1.22
CCM2-206ENST00000474617 RTP4Q96DX8 246 aa22.7■■□□□ 1.22
CCM2-206ENST00000474617 TMEM121Q9BTD3 319 aa22.7■■□□□ 1.22
CCM2-206ENST00000474617 PCDH18Q9HCL0 1135 aa22.7■■□□□ 1.22
CCM2-206ENST00000474617 DDX43Q9NXZ2 648 aaKnown RBP22.7■■□□□ 1.22
CCM2-206ENST00000474617 SLC12A6Q9UHW9 1150 aa22.7■■□□□ 1.22
CCM2-206ENST00000474617 KIF3CO14782 793 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 SHBGP04278 402 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 RBP3P10745 1247 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 NOS2P35228 1153 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 CHKAP35790 457 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 VPS41P49754 854 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 MAGOHP61326 146 aaKnown RBP22.69■■□□□ 1.22
CCM2-206ENST00000474617 DYNLT1P63172 113 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 ATP11AP98196 1134 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 MAPRE1Q15691 268 aaKnown RBP22.69■■□□□ 1.22
CCM2-206ENST00000474617 UPP1Q16831 310 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 TRIM71Q2Q1W2 868 aaKnown RBP22.69■■□□□ 1.22
CCM2-206ENST00000474617 DEFB115Q30KQ5 88 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 SCYL2Q6P3W7 929 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 PIGZQ86VD9 579 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 SIX6OS1Q8N1H7 587 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 ZBTB9Q96C00 473 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 PIWIL1Q96J94 861 aaKnown RBP22.69■■□□□ 1.22
CCM2-206ENST00000474617 GLT1D1Q96MS3 346 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 SLC9A7Q96T83 725 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 SYT15Q9BQS2 421 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 AGO3Q9H9G7 860 aaKnown RBP22.69■■□□□ 1.22
CCM2-206ENST00000474617 CNGB3Q9NQW8 809 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 FARP1Q9Y4F1 1045 aaPredicted RBP22.69■■□□□ 1.22
CCM2-206ENST00000474617 THSD7BQ9C0I4 1608 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 GRIN2DO15399 1336 aa22.69■■□□□ 1.22
CCM2-206ENST00000474617 A0A087WUV0 522 aaPredicted RBP22.68■■□□□ 1.22
CCM2-206ENST00000474617 GABBR2O75899 941 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 CD48P09326 243 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 LCP1P13796 627 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 CD52P31358 61 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 MAGEA4P43358 317 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 ZNF135P52742 658 aaPredicted RBP22.68■■□□□ 1.22
CCM2-206ENST00000474617 ACLYP53396 1101 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 BCAR1P56945 870 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 YWHAZP63104 245 aaKnown RBP22.68■■□□□ 1.22
CCM2-206ENST00000474617 MRPS5P82675 430 aaKnown RBP22.68■■□□□ 1.22
CCM2-206ENST00000474617 NR1H3Q13133 447 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 LPIN1Q14693 890 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 CDO1Q16878 200 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 ANKRD20A8PQ5CZ79 823 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 LRRC31Q6UY01 552 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 CAPNS2Q96L46 248 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 FAM118BQ9BPY3 351 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 ACBD6Q9BR61 282 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 SNRNP25Q9BV90 132 aaKnown RBP22.68■■□□□ 1.22
CCM2-206ENST00000474617 RNF186Q9NXI6 227 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 NINJ2Q9NZG7 142 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 FETUBQ9UGM5 382 aa22.68■■□□□ 1.22
CCM2-206ENST00000474617 BCLAF3A2AJT9 711 aaKnown RBP22.67■■□□□ 1.22
CCM2-206ENST00000474617 ALOX15BO15296 676 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 CDH16O75309 829 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 GRAP2O75791 330 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 EOMESO95936 686 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 IFNB1P01574 187 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 LSP1P33241 339 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 ARL4CP56559 192 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 TRIM32Q13049 653 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 TUSC3Q13454 348 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 RASA2Q15283 850 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 ZNF618Q5T7W0 954 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 SPATS2Q86XZ4 545 aaKnown RBP22.67■■□□□ 1.22
CCM2-206ENST00000474617 CDKL3Q8IVW4 592 aaPredicted RBP22.67■■□□□ 1.22
CCM2-206ENST00000474617 SCML4Q8N228 414 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 MYCBPAPQ8TBZ2 947 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 NT5C3BQ969T7 300 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 MED10Q9BTT4 135 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 EPN3Q9H201 632 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 PAK5Q9P286 719 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 LGALS13Q9UHV8 139 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 ACTL7BQ9Y614 415 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 ERICH4A6NGS2 130 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 PIK3R2O00459 728 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 TKTP29401 623 aaKnown RBP22.67■■□□□ 1.22
CCM2-206ENST00000474617 HPDP32754 393 aaPredicted RBP22.67■■□□□ 1.22
CCM2-206ENST00000474617 MMP13P45452 471 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 ATP1A2P50993 1020 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 CLCNKBP51801 687 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 CCDC142Q17RM4 750 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 DNAJC21Q5F1R6 531 aaKnown RBP22.67■■□□□ 1.22
CCM2-206ENST00000474617 CLEC20AQ6ZU45 233 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 PLD5Q8N7P1 536 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 IRGQQ8WZA9 623 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 PRCCQ92733 491 aaPredicted RBP22.67■■□□□ 1.22
CCM2-206ENST00000474617 SMARCD1Q96GM5 515 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 SLC2A13Q96QE2 648 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 B3GNT5Q9BYG0 378 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 PNPLA8Q9NP80 782 aa22.67■■□□□ 1.22
CCM2-206ENST00000474617 SF3B1O75533 1304 aaKnown RBP eCLIP22.66■■□□□ 1.224e-7■■■■■ 133.7
CCM2-206ENST00000474617 C9IYK1 514 aa22.66■■□□□ 1.22
CCM2-206ENST00000474617 M0QZQ0 153 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms