RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	BTBD10	Q9BSF8	475 aa		11.18	□□□□□ -0.62
LSS-208	ENST00000474319	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.18	□□□□□ -0.62
LSS-208	ENST00000474319	GNAZ	P19086	355 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	RBL1	P28749	1068 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	SESN2	P58004	480 aa	Predicted RBP	11.17	□□□□□ -0.62
LSS-208	ENST00000474319	RPL10A	P62906	217 aa	Known RBP	11.17	□□□□□ -0.62
LSS-208	ENST00000474319	SARNP	P82979	210 aa	Known RBP	11.17	□□□□□ -0.62
LSS-208	ENST00000474319	ROR1	Q01973	937 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	OLIG2	Q13516	323 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	DPYSL3	Q14195	570 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	XKR3	Q5GH77	459 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	VWA5B1	Q5TIE3	1220 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	NUDCD3	Q8IVD9	361 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	ZNF483	Q8TF39	744 aa	Predicted RBP	11.17	□□□□□ -0.62
LSS-208	ENST00000474319	DCAKD	Q8WVC6	231 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	CGRRF1	Q99675	332 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	C2CD2	Q9Y426	696 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	AK5	Q9Y6K8	562 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	LTBP3	Q9NS15	1303 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319		A0A0B4J269	797 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	PRPF4	O43172	522 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
LSS-208	ENST00000474319	ITGB3	P05106	788 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	PDGFRA	P16234	1089 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	STXBP2	Q15833	593 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	IL31	Q6EBC2	164 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	KBTBD2	Q8IY47	623 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	TEX9	Q8N6V9	391 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	PPFIBP2	Q8ND30	876 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.17	□□□□□ -0.62
LSS-208	ENST00000474319	NIF3L1	Q9GZT8	377 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	STOML1	Q9UBI4	398 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	PRR5-ARHGAP8	B1AHC4	643 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	HCRT	O43612	131 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	ZWINT	O95229	277 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	LUC7L3	O95232	432 aa	Known RBP	11.17	□□□□□ -0.62
LSS-208	ENST00000474319	HMGCR	P04035	888 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	OAT	P04181	439 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	NCF2	P19878	526 aa	Predicted RBP	11.17	□□□□□ -0.62
LSS-208	ENST00000474319	ZNF157	P51786	506 aa	Predicted RBP	11.17	□□□□□ -0.62
LSS-208	ENST00000474319	ARHGAP8	P85298	464 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	TCEAL1	Q15170	157 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	IZUMO2	Q6UXV1	221 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	LRRC74B	Q6ZQY2	392 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	C15orf39	Q6ZRI6	1047 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	GSTCD	Q8NEC7	633 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	PGBD4	Q96DM1	585 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	CPB2	Q96IY4	423 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	BATF3	Q9NR55	127 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	PDGFC	Q9NRA1	345 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	USP18	Q9UMW8	372 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319	SHOC2	Q9UQ13	582 aa		11.17	□□□□□ -0.62
LSS-208	ENST00000474319		A0A1B0GVG6	124 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	ZBED1	O96006	694 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	SUPT20HL2	P0C7V6	817 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	ACVR2B	Q13705	512 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	DUOXA2	Q1HG44	320 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	EFHC2	Q5JST6	749 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	RGS9BP	Q6ZS82	235 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	ZNF677	Q86XU0	584 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	BANP	Q8N9N5	519 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	RBM15B	Q8NDT2	890 aa	Known RBP	11.16	□□□□□ -0.62
LSS-208	ENST00000474319	PEBP4	Q96S96	227 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	B3GNT5	Q9BYG0	378 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	ST6GALNAC4	Q9H4F1	302 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	MAN1C1	Q9NR34	630 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	LTBP1	Q14766	1721 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	C2CD2L	O14523	706 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	TCEA3	O75764	348 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	LYPLA2	O95372	231 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	NFIC	P08651	508 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	TBXAS1	P24557	533 aa	Predicted RBP	11.16	□□□□□ -0.62
LSS-208	ENST00000474319	SLC45A4	Q5BKX6	768 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.16	□□□□□ -0.62
LSS-208	ENST00000474319	PRAMEF19	Q5SWL8	479 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	ARMCX6	Q7L4S7	300 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	SCUBE3	Q8IX30	993 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	KCTD17	Q8N5Z5	321 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	RNF148	Q8N7C7	305 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	C2orf69	Q8N8R5	385 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	SMC1B	Q8NDV3	1235 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	SLC26A7	Q8TE54	656 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	C20orf27	Q9GZN8	174 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	ACSS3	Q9H6R3	686 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	DCLRE1B	Q9H816	532 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	PDE4DIP	Q5VU43	2346 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	IQANK1	A0A1B0GTG1	560 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	PDHX	O00330	501 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	MAP3K7	O43318	606 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	OPHN1	O60890	802 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	ATP5H	O75947	161 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	STBD1	O95210	358 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	PSMG1	O95456	288 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	PRKCB	P05771	671 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	ATP6V1C1	P21283	382 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	TMEM62	Q0P6H9	643 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	PIGH	Q14442	188 aa	Predicted RBP	11.16	□□□□□ -0.62
LSS-208	ENST00000474319	KLHL38	Q2WGJ6	581 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	RALGPS1	Q5JS13	557 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	RASIP1	Q5U651	963 aa		11.16	□□□□□ -0.62
LSS-208	ENST00000474319	CES4A	Q5XG92	561 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms