RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 AWAT1Q58HT5 328 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 C16orf52Q8NHV5 167 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 KBTBD7Q8WVZ9 684 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 MAML1Q92585 1016 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 SNX18Q96RF0 628 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 STRBPQ96SI9 672 aaKnown RBP4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 FAM118BQ9BPY3 351 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 DPCDQ9BVM2 203 aaPredicted RBP4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 DPH1Q9BZG8 443 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 BTBD1Q9H0C5 482 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 NUP62CLQ9H1M0 184 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 CXorf36Q9H7Y0 433 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 CPNE7Q9UBL6 633 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 LPAR3Q9UBY5 353 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 USP1O94782 785 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 BRAFP15056 766 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 MYO1EQ12965 1108 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 LONRF1Q17RB8 773 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 MRPL10Q7Z7H8 261 aaKnown RBP4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 CAND1Q86VP6 1230 aaKnown RBP4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 SESTD1Q86VW0 696 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 SLC15A3Q8IY34 581 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 NSMCE1Q8WV22 266 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 SOCS4Q8WXH5 440 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 PMM1Q92871 262 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 PHKBQ93100 1093 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 COQ8BQ96D53 544 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 MPHOSPH6Q99547 160 aaKnown RBP4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 FOXP1Q9H334 677 aaPredicted RBP4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 SMURF2Q9HAU4 748 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 ASIC5Q9NY37 505 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 XPR1Q9UBH6 696 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 CORO2BQ9UQ03 480 aa4.35□□□□□ -1.71
TMEM50B-208ENST00000474272 ISM1B1AKI9 464 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 UBE2Q2LH0YL09 131 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 DSCR3O14972 297 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 KPNA5O15131 536 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 TJP3O95049 919 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 CHRM5P08912 532 aaPredicted RBP4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 IFIT2P09913 472 aaKnown RBP4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 PRIM2P49643 509 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 CASP5P51878 434 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 SUMO3P55854 103 aaPredicted RBP4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 UCP3P55916 312 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 PSG6Q00889 435 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 FMO1Q01740 532 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 CNGA2Q16280 664 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 FAM187BQ17R55 369 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 BCDIN3DQ7Z5W3 292 aaKnown RBP4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 C11orf96Q7Z7L8 435 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 SAMD3Q8N6K7 520 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 TMEM171Q8WVE6 324 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 OSCP1Q8WVF1 389 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 PRR25Q96S07 402 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 MMS19Q96T76 1030 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 TBCBQ99426 244 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 FNIP2Q9P278 1114 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 OGDHLQ9ULD0 1010 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 GABRQQ9UN88 632 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 PLEKHM1Q9Y4G2 1056 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 SNX14Q9Y5W7 946 aa4.34□□□□□ -1.71
TMEM50B-208ENST00000474272 LY6G6EA0A0G2JKS1 128 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 TRIM43BA6NCK2 446 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 RHPN2P1A8MT19 583 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 RASA4BC9J798 803 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 F8W8V4 182 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 BTN3A1O00481 513 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 RASA4O43374 803 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 GCATO75600 419 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 SERPINB3P29508 390 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 PDE6CP51160 858 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 ZNF91Q05481 1191 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 BRD3Q15059 726 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 MEX3CQ5U5Q3 659 aaKnown RBP4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 XRRA1Q6P2D8 792 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 ZNF783Q6ZMS7 281 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 MEPCEQ7L2J0 689 aaKnown RBP4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 OR6B3Q8NGW1 331 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 GJA10Q969M2 543 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 TRIM43Q96BQ3 446 aaPredicted RBP4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 VCPIP1Q96JH7 1222 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 MSLNLQ96KJ4 702 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 RPS6KC1Q96S38 1066 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 ELAC2Q9BQ52 826 aaKnown RBP4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 ZNF287Q9HBT7 754 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 TMEM184CQ9NVA4 438 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 COL20A1Q9P218 1284 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 AFF4Q9UHB7 1163 aaKnown RBP4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 SHOC2Q9UQ13 582 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 SNX13Q9Y5W8 968 aa4.33□□□□□ -1.72
TMEM50B-208ENST00000474272 ALPLP05186 524 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 DLDP09622 509 aaKnown RBP4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 TSHRP16473 764 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 SCP2P22307 547 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 VIPR2P41587 438 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 SLC11A2P49281 568 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 AK2P54819 239 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 RPS16P62249 146 aaKnown RBP4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 GHRHRQ02643 423 aa4.32□□□□□ -1.72
TMEM50B-208ENST00000474272 ZNF543Q08ER8 600 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms