RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 USP1O94782 785 aa14.81□□□□□ -0.04
NHLRC3-204ENST00000473371 ARL2P36404 184 aa14.81□□□□□ -0.04
NHLRC3-204ENST00000473371 YWHAZP63104 245 aaKnown RBP14.81□□□□□ -0.04
NHLRC3-204ENST00000473371 ZNF699Q32M78 642 aa14.81□□□□□ -0.04
NHLRC3-204ENST00000473371 CMASQ8NFW8 434 aaPredicted RBP14.81□□□□□ -0.04
NHLRC3-204ENST00000473371 SLC7A3Q8WY07 619 aa14.81□□□□□ -0.04
NHLRC3-204ENST00000473371 ATG4CQ96DT6 458 aa14.81□□□□□ -0.04
NHLRC3-204ENST00000473371 RPAP3Q9H6T3 665 aaPredicted RBP14.81□□□□□ -0.04
NHLRC3-204ENST00000473371 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 PRR5-ARHGAP8B1AHC4 643 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 RTN3O95197 1032 aaPredicted RBP14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 MRPS5P82675 430 aaKnown RBP14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 ARHGAP8P85298 464 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 TFAMQ00059 246 aaKnown RBP14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 DUOXA2Q1HG44 320 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 RASIP1Q5U651 963 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 CES4AQ5XG92 561 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 C1orf228Q6PIY5 440 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 NSUN6Q8TEA1 469 aaKnown RBP14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 CCDC106Q9BWC9 280 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 NXF1Q9UBU9 619 aaKnown RBP14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 PPM1HQ9ULR3 514 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 USP18Q9UMW8 372 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 TRUB2O95900 331 aaKnown RBP14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 CDH6P55285 790 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 NOMO1Q15155 1222 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 TBCCQ15814 346 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 FAXCQ5TGI0 409 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 MEX3CQ5U5Q3 659 aaKnown RBP14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 FKBP1CQ5VVH2 108 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 FAM83AQ86UY5 434 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 WNK4Q96J92 1243 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 TUBGCP5Q96RT8 1024 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 DHX33Q9H6R0 707 aaKnown RBP14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 ZNF302Q9NR11 478 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 PCMTD2Q9NV79 361 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 SIRPGQ9P1W8 387 aa14.8□□□□□ -0.04
NHLRC3-204ENST00000473371 MEI4A8MW99 385 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 RFPL1O75677 317 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 OATP04181 439 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 HIRAP54198 1017 aaPredicted RBP14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 UBAP2LQ14157 1087 aaKnown RBP14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 CDHR1Q96JP9 859 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 CPXM1Q96SM3 734 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 GPAMQ9HCL2 828 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 ZNF180Q9UJW8 692 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 HBS1LQ9Y450 684 aaKnown RBP14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 ARHGAP42A6NI28 874 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 TTLL13PA6NNM8 815 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 MED7O43513 233 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 UGT1A9O60656 530 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 KRT38O76015 456 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 ATG7O95352 703 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 C1QAP02745 245 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 OSBPP22059 807 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 CRABP2P29373 138 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 CDC16Q13042 620 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 TEX44Q53QW1 395 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 XYLT1Q86Y38 959 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 ARHGAP18Q8N392 663 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 PPP1R14CQ8TAE6 165 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 UGT1A7Q9HAW7 530 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 UGT1A10Q9HAW8 530 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 UGT1A8Q9HAW9 530 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 PAK5Q9P286 719 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 DNAJB4Q9UDY4 337 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 VWA5AO00534 786 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 KCNN4O15554 427 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 FKBP6O75344 327 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 ITGBL1O95965 494 aaPredicted RBP14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 ERBB2P04626 1255 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 GSTT1P30711 240 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 RAP1GAPP47736 663 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 STX3Q13277 289 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 MTMR2Q13614 643 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 ZCCHC23Q6ZST2 131 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 NDUFAF2Q8N183 169 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 PPP2R3CQ969Q6 453 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 TMEM134Q9H6X4 195 aa14.79□□□□□ -0.04
NHLRC3-204ENST00000473371 SERPINA6P08185 405 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 CCNFP41002 786 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 IRX4P78413 519 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 ORC1Q13415 861 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 CUL3Q13618 768 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 TFDP2Q14188 446 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 HIC1Q14526 733 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 TMCO4Q5TGY1 634 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 GMLQ99445 158 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 EBF4Q9BQW3 602 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 LHX5Q9H2C1 402 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 POPDC2Q9HBU9 364 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 SMYD2Q9NRG4 433 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 TRDMT1O14717 391 aaKnown RBP14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 ASPAP45381 313 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 RPS6KA3P51812 740 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 CDK18Q07002 472 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 CAPSQ13938 189 aa14.78□□□□□ -0.04
NHLRC3-204ENST00000473371 CFAP157Q5JU67 520 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms