RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 UBR7Q8N806 425 aa23.77■■□□□ 1.4
PTP4A1-203ENST00000473334 CLSTN2Q9H4D0 955 aa23.77■■□□□ 1.4
PTP4A1-203ENST00000473334 FBRSL1Q9HCM7 1045 aaKnown RBP23.77■■□□□ 1.4
PTP4A1-203ENST00000473334 CYLDQ9NQC7 956 aa23.77■■□□□ 1.4
PTP4A1-203ENST00000473334 TBC1D14Q9P2M4 693 aa23.77■■□□□ 1.4
PTP4A1-203ENST00000473334 SH3BP1Q9Y3L3 701 aa23.77■■□□□ 1.4
PTP4A1-203ENST00000473334 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.77■■□□□ 1.4
PTP4A1-203ENST00000473334 SCAMP3O14828 347 aaKnown RBP23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 LILRB5O75023 590 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 CYP17A1P05093 508 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 CCDC192P0DO97 292 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 SLC8A3P57103 927 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 SGO2Q562F6 1265 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 CCDC186Q7Z3E2 898 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 ADGRG2Q8IZP9 1017 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 ANKRD52Q8NB46 1076 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 LMO3Q8TAP4 145 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 OTUB2Q96DC9 234 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 UBXN6Q9BZV1 441 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 NMUR1Q9HB89 426 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 OSER1Q9NX31 292 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 USP3Q9Y6I4 520 aa23.76■■□□□ 1.39
PTP4A1-203ENST00000473334 A0A1W2PQH9 124 aa23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 AFPP02771 609 aaKnown RBP23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 ATP5C1P36542 298 aaKnown RBP23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 PSEN1P49768 467 aa23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 DHCR24Q15392 516 aa23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 GOLGA7BQ2TAP0 167 aa23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 FBXO43Q4G163 708 aa23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 CLEC17AQ6ZS10 378 aa23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 TTC30AQ86WT1 665 aa23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 PPM1KQ8N3J5 372 aa23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 TSPAN16Q9UKR8 245 aa23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 KIAA1549LQ6ZVL6 1849 aa23.75■■□□□ 1.39
PTP4A1-203ENST00000473334 K7ESF4 209 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 RNF40O75150 1001 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 TBX18O95935 607 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 VDRP11473 427 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 CD19P15391 556 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 BCAT1P54687 386 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 GAB4Q2WGN9 574 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 PKN3Q6P5Z2 889 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 PIGZQ86VD9 579 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 MLKLQ8NB16 471 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 C2orf42Q9NWW7 574 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 HESX1Q9UBX0 185 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 NAGPAQ9UK23 515 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 KIAA1257Q9ULG3 409 aa23.74■■□□□ 1.39
PTP4A1-203ENST00000473334 ATG13O75143 517 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 ADH1CP00326 375 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 IRF1P10914 325 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 RARGP13631 454 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 OPRD1P41143 372 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 GOLGA8FQ08AF8 430 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 GOLGA8DPQ0D2H9 430 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 RAB41Q5JT25 222 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 KLHDC10Q6PID8 442 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 TMEM270Q6UE05 265 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 SCD5Q86SK9 330 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 SUMF1Q8NBK3 374 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 EHBP1Q8NDI1 1231 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 KLF16Q9BXK1 252 aaPredicted RBP23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 PCDHB4Q9Y5E5 795 aa23.73■■□□□ 1.39
PTP4A1-203ENST00000473334 ATG2BQ96BY7 2078 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 FAM186AA6NE01 2351 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 RIF1Q5UIP0 2472 aaKnown RBP23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 CHURC1-FNTBB4DL54 471 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 XPO1O14980 1071 aaKnown RBP23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 PAEPP09466 180 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 GCNT1Q02742 428 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 BST2Q10589 180 aaKnown RBP23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 RHBDF2Q6PJF5 856 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 TADA2BQ86TJ2 420 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 ARHGEF19Q8IW93 802 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 ZNF276Q8N554 614 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 EZH1Q92800 747 aaPredicted RBP23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 KAT5Q92993 513 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 WBP2Q969T9 261 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 CNOT6LQ96LI5 555 aaKnown RBP23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 MED15Q96RN5 788 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 EPC1Q9H2F5 836 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 CLIC5Q9NZA1 410 aa23.72■■□□□ 1.39
PTP4A1-203ENST00000473334 MYOFQ9NZM1 2061 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 O00370 1275 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 RALAP11233 206 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 ADH5P11766 374 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 EIF2DP41214 584 aaKnown RBP23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 PDE4CQ08493 712 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 C10orf120Q5SQS8 335 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 BBS7Q8IWZ6 715 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 CDK5RAP1Q96SZ6 601 aaKnown RBP23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 INTS2Q9H0H0 1204 aaKnown RBP23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 NUP62CLQ9H1M0 184 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 DNMT3LQ9UJW3 386 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 NUDT5Q9UKK9 219 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 CFAP54Q96N23 3096 aa23.71■■□□□ 1.39
PTP4A1-203ENST00000473334 FRYLO94915 3013 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 HOXA6P31267 233 aa23.7■■□□□ 1.38
PTP4A1-203ENST00000473334 FNTBP49356 437 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms