RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 SGO2Q562F6 1265 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 TMEM196Q5HYL7 178 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 TRIM68Q6AZZ1 485 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 TXNDC11Q6PKC3 985 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 CCDC186Q7Z3E2 898 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 ALYREFQ86V81 257 aaKnown RBP13.37□□□□□ -0.27
C9orf85-204ENST00000473252 MAML2Q8IZL2 1156 aaPredicted RBP13.37□□□□□ -0.27
C9orf85-204ENST00000473252 SPEM1Q8N4L4 309 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 RIN3Q8TB24 985 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 CDK5RAP1Q96SZ6 601 aaKnown RBP13.37□□□□□ -0.27
C9orf85-204ENST00000473252 ARID3AQ99856 593 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 PRMT8Q9NR22 394 aaPredicted RBP13.37□□□□□ -0.27
C9orf85-204ENST00000473252 LMBRD1Q9NUN5 540 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 GMIPQ9P107 970 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 CPQQ9Y646 472 aa13.37□□□□□ -0.27
C9orf85-204ENST00000473252 GTPBP10A4D1E9 387 aaKnown RBP13.36□□□□□ -0.27
C9orf85-204ENST00000473252 COCHO43405 550 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 GJA4P35212 333 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 ATP5C1P36542 298 aaKnown RBP13.36□□□□□ -0.27
C9orf85-204ENST00000473252 SOX9P48436 509 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 BCAT1P54687 386 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 GOLGA8FQ08AF8 430 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 GOLGA8DPQ0D2H9 430 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 MTAPQ13126 283 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 PON2Q15165 354 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 RAB41Q5JT25 222 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 ENOSF1Q7L5Y1 443 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 FAM114A1Q8IWE2 563 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 ADGRG2Q8IZP9 1017 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 ARHGAP18Q8N392 663 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 PPM1KQ8N3J5 372 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 NELL1Q92832 810 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 NKD2Q969F2 451 aaPredicted RBP13.36□□□□□ -0.27
C9orf85-204ENST00000473252 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
C9orf85-204ENST00000473252 NACA2Q9H009 215 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 FAM86C1Q9NVL1 165 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 CLIC5Q9NZA1 410 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 HESX1Q9UBX0 185 aa13.36□□□□□ -0.27
C9orf85-204ENST00000473252 OTOL1A6NHN0 477 aaPredicted RBP13.35□□□□□ -0.27
C9orf85-204ENST00000473252 XPO1O14980 1071 aaKnown RBP13.35□□□□□ -0.27
C9orf85-204ENST00000473252 TLR5O60602 858 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 ATG13O75143 517 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 RALAP11233 206 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 ARSAP15289 507 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 EIF2DP41214 584 aaKnown RBP13.35□□□□□ -0.27
C9orf85-204ENST00000473252 CXCL12P48061 93 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 BST2Q10589 180 aaKnown RBP13.35□□□□□ -0.27
C9orf85-204ENST00000473252 LRMPQ12912 555 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 TPD52L1Q16890 204 aaPredicted RBP13.35□□□□□ -0.27
C9orf85-204ENST00000473252 SCML4Q8N228 414 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 TTC8Q8TAM2 541 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 CNOT6LQ96LI5 555 aaKnown RBP13.35□□□□□ -0.27
C9orf85-204ENST00000473252 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 P2RY13Q9BPV8 354 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 ZSCAN32Q9NX65 697 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 TSPAN16Q9UKR8 245 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 SH3BP1Q9Y3L3 701 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 PCDHGA2Q9Y5H1 932 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 WNT6Q9Y6F9 365 aa13.35□□□□□ -0.27
C9orf85-204ENST00000473252 KIAA1549LQ6ZVL6 1849 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 CHURC1-FNTBB4DL54 471 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 SETSIPP0DME0 302 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 C7P10643 843 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 HOXA6P31267 233 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 PLA2G4AP47712 749 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 GALK1P51570 392 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 CSTF1Q05048 431 aaKnown RBP13.34□□□□□ -0.27
C9orf85-204ENST00000473252 CNGA2Q16280 664 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 PREPLQ4J6C6 727 aaPredicted RBP13.34□□□□□ -0.27
C9orf85-204ENST00000473252 PM20D1Q6GTS8 502 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 TMEM270Q6UE05 265 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 LCLAT1Q6UWP7 414 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 HTR3DQ70Z44 454 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 GPRIN1Q7Z2K8 1008 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 PIGZQ86VD9 579 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 ZBTB44Q8NCP5 570 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 KCTD13Q8WZ19 329 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 CD101Q93033 1021 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 CHFRQ96EP1 664 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 ZFRQ96KR1 1074 aaKnown RBP13.34□□□□□ -0.27
C9orf85-204ENST00000473252 LINC00597Q9H2U6 94 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 CCSER2Q9H7U1 834 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
C9orf85-204ENST00000473252 CFAP97Q9P2B7 532 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 DNMT3LQ9UJW3 386 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 CNTN6Q9UQ52 1028 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 PCDHB4Q9Y5E5 795 aa13.34□□□□□ -0.27
C9orf85-204ENST00000473252 O00370 1275 aa13.33□□□□□ -0.28
C9orf85-204ENST00000473252 GFRA3O60609 400 aa13.33□□□□□ -0.28
C9orf85-204ENST00000473252 LILRB5O75023 590 aa13.33□□□□□ -0.28
C9orf85-204ENST00000473252 ADH1CP00326 375 aa13.33□□□□□ -0.28
C9orf85-204ENST00000473252 RARGP13631 454 aa13.33□□□□□ -0.28
C9orf85-204ENST00000473252 CD19P15391 556 aa13.33□□□□□ -0.28
C9orf85-204ENST00000473252 DHCR24Q15392 516 aa13.33□□□□□ -0.28
C9orf85-204ENST00000473252 MEA1Q16626 185 aa13.33□□□□□ -0.28
C9orf85-204ENST00000473252 PKDCCQ504Y2 493 aa13.33□□□□□ -0.28
C9orf85-204ENST00000473252 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
C9orf85-204ENST00000473252 RBM43Q6ZSC3 357 aaKnown RBP13.33□□□□□ -0.28
C9orf85-204ENST00000473252 TTC30AQ86WT1 665 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms