RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 ASNSD1Q9NWL6 643 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCCB-211ENST00000473073 COX16Q9P0S2 106 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 BACE2Q9Y5Z0 518 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 GBF1Q92538 1859 aa13.19□□□□□ -0.3
PCCB-211ENST00000473073 LINC01553A4QN01 128 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 TRIM66O15016 1216 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 FBXO21O94952 628 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 SEC24AO95486 1093 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 FGGP02679 453 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 SCNN1AP37088 669 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 KRT17Q04695 432 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 VSTM1Q6UX27 236 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 CEP112Q8N8E3 955 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 NOA1Q8NC60 698 aaKnown RBP13.18□□□□□ -0.3
PCCB-211ENST00000473073 SPPL2BQ8TCT7 592 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 GIPC2Q8TF65 315 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 AP1M1Q9BXS5 423 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 ZBP1Q9H171 429 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 PNPLA8Q9NP80 782 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 USP3Q9Y6I4 520 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 TCRBV7S2A1N4TA0A589 114 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 CTAGE15A4D2H0 777 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 PGRMC1O00264 195 aaKnown RBP13.18□□□□□ -0.3
PCCB-211ENST00000473073 DPYSL4O14531 572 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 TADA3O75528 432 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 DAB1O75553 588 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 RNF8O76064 485 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 LTFP02788 710 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 CTAGE8P0CG41 777 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 HAPLN1P10915 354 aaPredicted RBP13.18□□□□□ -0.3
PCCB-211ENST00000473073 NCAM1P13591 858 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 ATF6P18850 670 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 MATKP42679 507 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 PAFAH1B1P43034 410 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 MAGEA11P43364 429 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 SULT1E1P49888 294 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
PCCB-211ENST00000473073 TEX35Q5T0J7 233 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 OTUD1Q5VV17 481 aaPredicted RBP13.18□□□□□ -0.3
PCCB-211ENST00000473073 SCYL2Q6P3W7 929 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 CTAGE6Q86UF2 777 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 CCDC50Q8IVM0 306 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 CTAGE4Q8IX94 777 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 RASGEF1CQ8N431 466 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
PCCB-211ENST00000473073 C8orf48Q96LL4 319 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 HERPUD2Q9BSE4 406 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 DDX23Q9BUQ8 820 aaKnown RBP13.18□□□□□ -0.3
PCCB-211ENST00000473073 EPC1Q9H2F5 836 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 POPDC2Q9HBU9 364 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 MRPL17Q9NRX2 175 aaKnown RBP13.18□□□□□ -0.3
PCCB-211ENST00000473073 USP18Q9UMW8 372 aa13.18□□□□□ -0.3
PCCB-211ENST00000473073 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCCB-211ENST00000473073 CES2O00748 559 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 CAPN9O14815 690 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 TEX28O15482 410 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 KRT1P04264 644 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 CA3P07451 260 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 SPATA31D3P0C874 917 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 DNAJB1P25685 340 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 HDAC4P56524 1084 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 MRPS25P82663 173 aaKnown RBP13.17□□□□□ -0.3
PCCB-211ENST00000473073 SMC1AQ14683 1233 aaKnown RBP13.17□□□□□ -0.3
PCCB-211ENST00000473073 SEL1L2Q5TEA6 688 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 PM20D1Q6GTS8 502 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 SPATA31D4Q6ZUB0 917 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 CYP4V2Q6ZWL3 525 aaPredicted RBP13.17□□□□□ -0.3
PCCB-211ENST00000473073 NUP93Q8N1F7 819 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 ACTRT1Q8TDG2 376 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 RAPGEF5Q92565 580 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 HSPH1Q92598 858 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 SLC2A13Q96QE2 648 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 C11orf84Q9BUA3 381 aaPredicted RBP13.17□□□□□ -0.3
PCCB-211ENST00000473073 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
PCCB-211ENST00000473073 GPATCH2LQ9NWQ4 482 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 LCMT1Q9UIC8 334 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 NUDT5Q9UKK9 219 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 NR2E1Q9Y466 385 aa13.17□□□□□ -0.3
PCCB-211ENST00000473073 REV3LO60673 3130 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.16□□□□□ -0.3
PCCB-211ENST00000473073 TRUB2O95900 331 aaKnown RBP13.16□□□□□ -0.3
PCCB-211ENST00000473073 BMPR1AP36894 532 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 PTPN9P43378 593 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 NME3Q13232 169 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 LONRF2Q1L5Z9 754 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 BSPRYQ5W0U4 402 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 DENND5BQ6ZUT9 1274 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 KATNAL2Q8IYT4 538 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 SPATA4Q8NEY3 305 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 SLC7A14Q8TBB6 771 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 HEMGNQ9BXL5 484 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 OXCT2Q9BYC2 517 aaPredicted RBP13.16□□□□□ -0.3
PCCB-211ENST00000473073 MAGEB5Q9BZ81 275 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 NMUR1Q9HB89 426 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 CYP4F11Q9HBI6 524 aa13.16□□□□□ -0.3
PCCB-211ENST00000473073 MAGED2Q9UNF1 606 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms